PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1577
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 315aa    MW: 34280.6 Da    PI: 8.1413
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1577genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like78.58.1e-2566117254
                        G2-like   2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 
                                     rl+Wt++LH++F  av+ L G +kA+Pk+ilelm+++ Lt ehv+SHLQk+R
  evm.model.AsparagusV1_03.1577  66 LRLKWTHDLHQKFSYAVNIL-GLDKAVPKKILELMNIPNLTKEHVASHLQKFR 117
                                    69******************.******************************** PP
2Myb_DNA-binding39.31.5e-1267117148
                                    TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r++WT ++++++  av+ lG +   +k+I + m+  ++t +++ s++qk++
  evm.model.AsparagusV1_03.1577  67 RLKWTHDLHQKFSYAVNILGLDkaVPKKILELMNiPNLTKEHVASHLQKFR 117
                                    89***********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MRRRRVISSD EATETVVRGI KAGATDYLVK PSSLATFRNI WQHAYRKELA SKKKGRRNED  60
ADGEKLRLKW THDLHQKFSY AVNILGLDKA VPKKILELMN IPNLTKEHVA SHLQKFRKFL  120
KTKGGRQSTK MTPEMLAAVS ARISSDMELG GCSGAQNGPV MPGHPFNQQP PYILTGHPPS  180
TFLVANPLQP WAHFQPPNNP ALNQPASNYT VHNPVVMSQA ENTPMPILRG GSGLGEGTLT  240
GQGQASNLDL ACQHAHNATD GVGSDIGFCN DEDMGDFLSS LLNSPKEDQG PGHKEDQGQG  300
PREEQGPGIA DLEE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58080.13e-29ARR-B family protein