PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1407 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 322aa MW: 35332.6 Da PI: 5.0917 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 39.4 | 1.1e-12 | 136 | 182 | 3 | 54 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h+e+Er+RR+riN ++Lr+llP+a +K +Ka+ L ++++++k+L evm.model.AsparagusV1_03.1407 136 KSHSEAERKRRERINAHHAKLRSLLPSA-----TKTDKATLLAEVIQHVKEL 182 79**************************.....9****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 322 aa Download sequence |
MNTAADGESS SYNTSTLNML EFQAYNQQQE DHDQQYSMIS SWPIPPPIHS FNQQFQGFYI 60 PPPHPPPPPI YGDLYTRSRA STALQFAYDG GGCNIIDPLG LAGLYNYIGS DGRGVQSSST 120 LSAQEIMDAK ALAASKSHSE AERKRRERIN AHHAKLRSLL PSATKTDKAT LLAEVIQHVK 180 ELKRQTSEIA EECSLLPTES DELTVDAASD DEGKFIVKAT LCCDDRSDLI PDLIKALKAL 240 RLRTLKAEIM TVGGRFKNLL VITGDEDFDE SQQQQQLIVA IQDALKAVME RATVSDEASA 300 VSGIKRQRTN NLATIPEHNS V* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 142 | 147 | ERKRRE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G68810.1 | 9e-65 | bHLH family protein |