PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1407
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 322aa    MW: 35332.6 Da    PI: 5.0917
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1407genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH39.41.1e-12136182354
                                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    ++h+e+Er+RR+riN   ++Lr+llP+a     +K +Ka+ L ++++++k+L
  evm.model.AsparagusV1_03.1407 136 KSHSEAERKRRERINAHHAKLRSLLPSA-----TKTDKATLLAEVIQHVKEL 182
                                    79**************************.....9****************99 PP

Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MNTAADGESS SYNTSTLNML EFQAYNQQQE DHDQQYSMIS SWPIPPPIHS FNQQFQGFYI  60
PPPHPPPPPI YGDLYTRSRA STALQFAYDG GGCNIIDPLG LAGLYNYIGS DGRGVQSSST  120
LSAQEIMDAK ALAASKSHSE AERKRRERIN AHHAKLRSLL PSATKTDKAT LLAEVIQHVK  180
ELKRQTSEIA EECSLLPTES DELTVDAASD DEGKFIVKAT LCCDDRSDLI PDLIKALKAL  240
RLRTLKAEIM TVGGRFKNLL VITGDEDFDE SQQQQQLIVA IQDALKAVME RATVSDEASA  300
VSGIKRQRTN NLATIPEHNS V*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1142147ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.19e-65bHLH family protein