PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1292
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NF-YA
Protein Properties Length: 289aa    MW: 31518.9 Da    PI: 9.8904
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1292genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA101.39.5e-32161217158
                      CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                                    +ep+YVNaKQy++Il+RR+ Rak+e+++kl +k+rkpylheSRh hA++R+Rg gGrF
  evm.model.AsparagusV1_03.1292 161 EEPIYVNAKQYHAILRRRELRAKQEAQNKL-IKGRKPYLHESRHIHAMKRARGVGGRF 217
                                    69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
MHLKHVKGLE MQNPDNKDPV QSSVYSTSNC PSSQLRSNQI ADQDFSSNHS SGQSHQELSV  60
SSEGTIQGKL VSAQSGNDNT YDKHVEAQMK ASAFSSGTTE AAFPSPKFDY NPSPASIPYA  120
YGDPYYGGVL AAYGPHAIIH PQMMGMVPSS RVPLPHEQAE EEPIYVNAKQ YHAILRRREL  180
RAKQEAQNKL IKGRKPYLHE SRHIHAMKRA RGVGGRFLNT KKLKQQTHSS ENGITTGSTV  240
TSTSSELSTV SNRGNNGGFH HQNHFGFPMT SSPSQWGTGK AVSSIVSR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.18e-49NF-YA family protein