PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1265
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 211aa    MW: 25071 Da    PI: 7.689
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1265genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding57.72.7e-18449147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                   rg W + Ede+l+++v+++G+++W++Ia++++ gR++k+c++rw++ 
  evm.model.AsparagusV1_03.1265  4 RGHWRPAEDEKLKELVARYGPHNWNAIAEKLQ-GRSGKSCRLRWFNQ 49
                                   899*****************************.***********996 PP
2Myb_DNA-binding54.82.1e-175699146
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
                Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                                   r ++T+eE+e+l+  ++ +G++ W+ Iar ++ gRt++ +k++w+ 
  evm.model.AsparagusV1_03.1265 56 RSPFTEEEEERLLASHRIHGNR-WAIIARLFP-GRTDNAVKNHWHV 99
                                   789*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 211 aa     Download sequence    
MCTRGHWRPA EDEKLKELVA RYGPHNWNAI AEKLQGRSGK SCRLRWFNQL DPRINRSPFT  60
EEEEERLLAS HRIHGNRWAI IARLFPGRTD NAVKNHWHVI MARKCRERSR FHSKKFDHHY  120
KEEKLKQGFS SLLPFTENYH RQHDNSRELM IKDNDNKIEF YDFLQVNTES SDSKCRSGVE  180
EEQEEDEEAK KEDGIPFIDF LGIREGNYVT *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17950.11e-75MYB family protein