PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1157

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Protein Properties

Length: 588aa MW: 64663.2 Da PI: 9.0727

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1157	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	45.6	1.2e-14	20	118	2	98
EEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT- CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangL 74 +k+lt+sdv++ gr+ lpkk ae+ + + ++ lt++d +s ++W+++++y +k+s+ yvl+ ++ +F + n+L evm.model.AsparagusV1_03.1157 20 EKQLTKSDVSSVGRILLPKKQAEAElpilED--KWGISLTVRDaLSCEKWTMRYRYwpNKYSKIYVLE-NTGDFIRKNNL 96 79******************999997543..36688999997777*****666666669999.******* PP -TT-EEEEEE-SSSEE..EEEEE- CS B3 75 kegDfvvFkldgrsefelvvkvfr 98 k gDf+ ++ d+r ++ +v +++ evm.model.AsparagusV1_03.1157 97 KPGDFIAIYQDNR--KKNFVCARK 118 *******5544..444676665 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MRTFWLKGDC DGQKLKFVLE KQLTKSDVSS VGRILLPKKQ AEAELPILED KWGISLTVRD 60 ALSCEKWTMR YRYWPNKYSK IYVLENTGDF IRKNNLKPGD FIAIYQDNRK KNFVCARKTE 120 RPPFPLELIA TDEEEDGRDN SQTAVQSYDY SASSPGNITV ASDPASSSAD IAPVGDHATE 180 PIVKPWDSWD HGSGDSWTDG FGVDHNLMDF YNCNHTQYRR LLSFDDRDLS LFDFSRPEED 240 DTETSRASEY MQKLNRPAFP KTAKIAEHKA PPPPPPPHSP SNPTSPWPHS PPSPPSPPLY 300 LSLPSPLSSS SFPCPPSLTL KPKPLPSLTL NPTRAQPPTS TPPLRQRGPQ PSSIPSHPPS 360 PPEGYTPPPS FDELPPESED EIAAAYEEIY GPAYSGFSVL GNDVYVMDSK VKKSSGSGLG 420 RKKREKANDG FDERVVQVRR VTKVVKGGKN MSFRAVVVVG DKKGRVGVGV GKAKEIVDAI 480 AKSAANARRN IIAVPMTKYL TFPHRADGDY GAAKVMLRPA SPGTGVIAGG AVRIVLEMAG 540 VENALGKQLG SDNALNNARA TLVAVQKMRQ FRDVARERGI PMEELWK*

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MRTFWLKGDC DGQKLKFVLE KQLTKSDVSS VGRILLPKKQ AEAELPILED KWGISLTVRD  60
ALSCEKWTMR YRYWPNKYSK IYVLENTGDF IRKNNLKPGD FIAIYQDNRK KNFVCARKTE  120
RPPFPLELIA TDEEEDGRDN SQTAVQSYDY SASSPGNITV ASDPASSSAD IAPVGDHATE  180
PIVKPWDSWD HGSGDSWTDG FGVDHNLMDF YNCNHTQYRR LLSFDDRDLS LFDFSRPEED  240
DTETSRASEY MQKLNRPAFP KTAKIAEHKA PPPPPPPHSP SNPTSPWPHS PPSPPSPPLY  300
LSLPSPLSSS SFPCPPSLTL KPKPLPSLTL NPTRAQPPTS TPPLRQRGPQ PSSIPSHPPS  360
PPEGYTPPPS FDELPPESED EIAAAYEEIY GPAYSGFSVL GNDVYVMDSK VKKSSGSGLG  420
RKKREKANDG FDERVVQVRR VTKVVKGGKN MSFRAVVVVG DKKGRVGVGV GKAKEIVDAI  480
AKSAANARRN IIAVPMTKYL TFPHRADGDY GAAKVMLRPA SPGTGVIAGG AVRIVLEMAG  540
VENALGKQLG SDNALNNARA TLVAVQKMRQ FRDVARERGI PMEELWK*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	421	426	RKKREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26790.1	3e-31	B3 family protein