PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1140

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

SBP

Protein Properties

Length: 175aa MW: 19497.8 Da PI: 9.9844

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1140	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	137.1	5.1e-43	62	139	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+e+C adl+ ak+yhrrhkvCe+hskapvv+v+gl+qrfCqqCsrfhelsefDe+krsCrrrLa+hnerrrk++a evm.model.AsparagusV1_03.1140 62 ACQAEKCPADLTGAKRYHRRHKVCEAHSKAPVVMVAGLRQRFCQQCSRFHELSEFDETKRSCRRRLAGHNERRRKSSA 139 5**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MDRAREPIEP KQTGKARLSM AVDDDEEEEQ ISQDVDKRRR SVSSPTPSSV VARRPAVAGG 60 VACQAEKCPA DLTGAKRYHR RHKVCEAHSK APVVMVAGLR QRFCQQCSRF HELSEFDETK 120 RSCRRRLAGH NERRRKSSAE SQGEGSSHCR QADQGGTIQI SVPGSPSYKH FQIR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G53160.1	8e-41	SBP family protein