PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1090 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 212aa MW: 24047.9 Da PI: 5.8891 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.7 | 4.9e-17 | 13 | 56 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g++T+eE+ ++ + +++lG++ W+ Ia++++ gRt++++k++w++ evm.model.AsparagusV1_03.1090 13 KGPFTEEEESIIRQQHRMLGNK-WSVIAKHVP-GRTDNDVKNFWHT 56 79********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence |
LRWINYLCPG LKKGPFTEEE ESIIRQQHRM LGNKWSVIAK HVPGRTDNDV KNFWHTTIKK 60 KIVEEENQEG SQGTNHHFFT NLLNVPDLSQ FKIPRPSASF LSLEMKKTNN WKDVVQPSSL 120 QVPQTSLGLS LCDPTDLIWY KEQNPELFMD CSNSGSSSSS VKGKEKVDQV DEINGERVNQ 180 VITNGDDGLG FDHELVDGWW NASLWRPDGS H* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G12720.1 | 1e-25 | MYB family protein |