PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_03.1006 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB_related | ||||||||
Protein Properties | Length: 205aa MW: 23163.9 Da PI: 6.0263 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.4 | 4.3e-10 | 43 | 77 | 15 | 48 |
HHHHTTTT..-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 15 avkqlGgg..tWktIartmgkgRtlkqcksrwqkyl 48 a++ + g+ +W++Ia +++ gRt++++k++w+++l evm.model.AsparagusV1_03.1006 43 AHQIHEGKvtRWSLIAGRLP-GRTANDVKNFWNTHL 77 7899999999**********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MKVLTGPTSN TSRTLKYIHR LHSASTTNHM LLLAPMFNST LLAHQIHEGK VTRWSLIAGR 60 LPGRTANDVK NFWNTHLSKQ LLAEKHGKEA EAAYVEVIKP QPQTIPWNWK WSKDNEASES 120 NNQQEEANIL KHLSTSSSTN ATCLESKNFS ASNIEEVGMM QELQADFRSE DIGSFGHDDF 180 LLEGFLGWED MRADISLWSD FEYI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66370.1 | 4e-14 | MYB family protein |