PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_03.1004

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 1238aa MW: 137480 Da PI: 9.1303

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_03.1004	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.4	9.1e-10	74	109	3	40
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqc 40 W++eE e++++a +++G++ W++++ t+ +R+ ++ evm.model.AsparagusV1_03.1004 74 QWSKEELERFYEAYRKHGKD-WRKVSGTVR-NRSSDMV 109 6***************99.*****.98766 PP

Sequence ? help Back to Top
Protein Sequence Length: 1238 aa Download sequence
MTFVRVLSDE GFNNRRAPGA RLESEEVLMA STRKSRGVNK RFAKINEEWT DKDATNANKN 60 RPRKKKLSDM LGPQWSKEEL ERFYEAYRKH GKDWRKVSGT VRNRSSDMVE ALYNMNKAYL 120 SLPEGIATAA GLIAMMTDHY NILEGSDSEH ESNDVARTSR RPQKRARGKY RLMSKGPDGP 180 CPDLLQLQSA SSSYACMSLL KRKRSGDLFP GSRPRAVGKR TPRIPVSSMY SKADADKMVS 240 VGTHGSKCEV NTAADEGVHV AALALAEASQ KGGSPQVSRT PGRRGEHLGR SPVYSGERKD 300 ADSEMDDSRS IGGFDEDYPE VSLGSREAEN GDFTKDLSYL MDTGCASTYE THKKEKKLQG 360 KQSKTARTKN DHFDDDKEAC SGTEEGLNIR NAKDESEVEL TDGKSARKSS RKRSRQLFSG 420 DESTAFDALQ TLADLSFHIL LPSSTVDSES SIQVKDEKRN IDCDEKSIVP ESMSATHVSD 480 KSKVSERKVR ARSTVVEVDA VTRKSAKHAK GIVPDAVMST EINQQAGTSN NKFQKRKRKP 540 LTGKVSKTEF ESASQKSETQ KIEAAVEEGR RSNKLKRFNQ GTSMVKQGKS SKSQDRLSSG 600 STDLARGVSD LNEPNMQIST TNQVSLPTKV RSRRKLELQK ALAGKESKPS EITGEDHSDS 660 HSLRVNNRML DSKERLLHGL SSRLLRRWCV FEWFYSAIDY PWFAKTEFVE YLNHVKLGHV 720 PRLTRVEWGV IRSSLGKPRR LSRKFLQEER EKLEQYRESV RTHYTELRAG VKEGLPTDLA 780 RPLSVGQRVS ACHPKTREIH DGSVLTVDRN RCRVQFDRPE LGVEFVMDID CMPLNPFENM 840 PEALKSQNAG IYKFCDSLTD IKLEGQPKDW KIGLSTKSPP NESLEIADGS SYISSPNYPM 900 NTLMKQAKGD TIDAIVQAKA AVNEVVVAAK QAMYNQPCTL AQIQAREADI KALAELARAL 960 DKKEALLIEL RHMNEEVSGS QKGSSTITDL ENFRKQYAVV LLQLRDANDQ VASALLYMRQ 1020 RNTYPGNSTP PWQKSIDGSA IPVAHQGSFN PLLLSQDSGS DVLEIVQSSR QKARSMVDVA 1080 VQATRGLKEG EDAFIRIGEA LGLPSRNSNS RYIPSEPAHE NSAYQDRPTS CKLEGAAGHT 1140 FSPKPNISND GNEQQLPADM ISNCVATLFM IQNCAERQYP PAEVAQVLDS AVTSLQPSCP 1200 QNLPVYREIE TCMGIIKNQM LALIPTQSTC SAEASMV*

Sequence ? help Back to Top

Protein Sequence Length: 1238 aa Download sequence

MTFVRVLSDE GFNNRRAPGA RLESEEVLMA STRKSRGVNK RFAKINEEWT DKDATNANKN  60
RPRKKKLSDM LGPQWSKEEL ERFYEAYRKH GKDWRKVSGT VRNRSSDMVE ALYNMNKAYL  120
SLPEGIATAA GLIAMMTDHY NILEGSDSEH ESNDVARTSR RPQKRARGKY RLMSKGPDGP  180
CPDLLQLQSA SSSYACMSLL KRKRSGDLFP GSRPRAVGKR TPRIPVSSMY SKADADKMVS  240
VGTHGSKCEV NTAADEGVHV AALALAEASQ KGGSPQVSRT PGRRGEHLGR SPVYSGERKD  300
ADSEMDDSRS IGGFDEDYPE VSLGSREAEN GDFTKDLSYL MDTGCASTYE THKKEKKLQG  360
KQSKTARTKN DHFDDDKEAC SGTEEGLNIR NAKDESEVEL TDGKSARKSS RKRSRQLFSG  420
DESTAFDALQ TLADLSFHIL LPSSTVDSES SIQVKDEKRN IDCDEKSIVP ESMSATHVSD  480
KSKVSERKVR ARSTVVEVDA VTRKSAKHAK GIVPDAVMST EINQQAGTSN NKFQKRKRKP  540
LTGKVSKTEF ESASQKSETQ KIEAAVEEGR RSNKLKRFNQ GTSMVKQGKS SKSQDRLSSG  600
STDLARGVSD LNEPNMQIST TNQVSLPTKV RSRRKLELQK ALAGKESKPS EITGEDHSDS  660
HSLRVNNRML DSKERLLHGL SSRLLRRWCV FEWFYSAIDY PWFAKTEFVE YLNHVKLGHV  720
PRLTRVEWGV IRSSLGKPRR LSRKFLQEER EKLEQYRESV RTHYTELRAG VKEGLPTDLA  780
RPLSVGQRVS ACHPKTREIH DGSVLTVDRN RCRVQFDRPE LGVEFVMDID CMPLNPFENM  840
PEALKSQNAG IYKFCDSLTD IKLEGQPKDW KIGLSTKSPP NESLEIADGS SYISSPNYPM  900
NTLMKQAKGD TIDAIVQAKA AVNEVVVAAK QAMYNQPCTL AQIQAREADI KALAELARAL  960
DKKEALLIEL RHMNEEVSGS QKGSSTITDL ENFRKQYAVV LLQLRDANDQ VASALLYMRQ  1020
RNTYPGNSTP PWQKSIDGSA IPVAHQGSFN PLLLSQDSGS DVLEIVQSSR QKARSMVDVA  1080
VQATRGLKEG EDAFIRIGEA LGLPSRNSNS RYIPSEPAHE NSAYQDRPTS CKLEGAAGHT  1140
FSPKPNISND GNEQQLPADM ISNCVATLFM IQNCAERQYP PAEVAQVLDS AVTSLQPSCP  1200
QNLPVYREIE TCMGIIKNQM LALIPTQSTC SAEASMV*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G21430.2	0.0	MYB_related family protein