PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_03.1002
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family HD-ZIP
Protein Properties Length: 675aa    MW: 75297.7 Da    PI: 6.4396
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_03.1002genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.54.2e-171772156
                                   TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
                       Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                                   r++  ++t++q + Lee+F+ n++p+++er ++ ++lgL+ ++Vk+WFqN+R++ k
  evm.model.AsparagusV1_03.1002 17 RKPYERHTRQQKRKLEEYFAVNQHPDERERMRIGRELGLDHSRVKFWFQNKRTQNK 72
                                   789999***********************************************998 PP

2START115.76.5e-372104172204
                                    HHHHHHHHHHHHHHHC-TT-EEEE......EXCCTTEEEEEEESSS......SCEEEEEEEECCSCHHHHHHHHHCCCGG CS
                          START   2 laeeaaqelvkkalaeepgWvkss......esengdevlqkfeeskv.....dsgealrasgvvdmvlallveellddke 70 
                                    +ae+aa+el+ +a+ ++p+W   +      e++n+ e+l ++++  v     ++ ea ra+++v m++ +lve+l d k 
  evm.model.AsparagusV1_03.1002 210 IAEAAADELLIMAQTGQPLWLPAAgpenyiEILNEGEYLLSVSKWAVpnsfgFTREATRAVTMVNMNAFRLVEILCDAK- 288
                                    799********************999****************888889999****************************. PP

                                    CT-TT-SEEEEEEEECTTEEEEEEEEXXTTXX-SSX.EEEEEEEEEEE..TTS-EEEEEEEEE-TTS--.-TTSEE-EES CS
                          START  71 qWdetlakaetlevissggalqlmvaelqalsplvp.RdfvfvRyirq.lgagdwvivdvSvdseqkppesssvvRaell 148
                                    +W+  +       v+  +++   ++ae+q++splvp Rd +f+Ry+++   + +wv+vdvS+d  ++ p      R++++
  evm.model.AsparagusV1_03.1002 289 KWSALFS-----GVVLRATTM-EISAEYQLPSPLVPtRDILFLRYCKKlPLERTWVVVDVSLDLFRSDPA---PNRCQKR 359
                                    ******9.....555555554.489***********************655789*********9999884...78***** PP

                                    SEEEEEEEECTCEEEEEEEE-EE..--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXX CS
                          START 149 pSgiliepksnghskvtwvehvd..lkgrlphwllrslvksglaegaktwvatlqrqc 204
                                    pSg++ie+ +++  kv+wvehv+  ++++ +h++++++v+sg+ +ga++w+a l+rq 
  evm.model.AsparagusV1_03.1002 360 PSGCIIEEIEEQTIKVIWVEHVEinVQANFVHAMYKPIVSSGIGFGARRWLAMLGRQS 417
                                    *********************9833578899***********************9986 PP

Sequence ? help Back to Top
Protein Sequence    Length: 675 aa     Download sequence    
MDSGSDSRSE EPPAQRRKPY ERHTRQQKRK LEEYFAVNQH PDERERMRIG RELGLDHSRV  60
KFWFQNKRTQ NKNKALKSEM EELRSKYESA MAQMEVMKES LRSAACSKCG GPLLGEETLN  120
ERQIRVGNAK LRDEINQGPT IEGNCIGVPF ACSSSFQQPI SIPGPSNFFI PNGANIENST  180
YNAAANGTTE STFNNTTEVL ENHANVFTQI AEAAADELLI MAQTGQPLWL PAAGPENYIE  240
ILNEGEYLLS VSKWAVPNSF GFTREATRAV TMVNMNAFRL VEILCDAKKW SALFSGVVLR  300
ATTMEISAEY QLPSPLVPTR DILFLRYCKK LPLERTWVVV DVSLDLFRSD PAPNRCQKRP  360
SGCIIEEIEE QTIKVIWVEH VEINVQANFV HAMYKPIVSS GIGFGARRWL AMLGRQSDRI  420
ANAMNCNIPY FSEFDAERAT RGTSPGNNVL KLAERMVLSF YAGLACSLAH GWVNEFGDGT  480
ESVKIASKRN VGDPRMPSGV IVNASVSFWV PAMPKRVFDF LCDESSRDKW DSPSEREKLV  540
PVVLIPTGIE SGNYISILKQ ANDKTKHKKK MFIQESCFDN TCSYLIYAPV SKRSVNVCIH  600
GGDQERIQLL PSGVTIVPDG PYWMTNGSLV TVSIQILSDS NPQTDVNPGS VELVNNLVMS  660
VVDSIKIGVV DENQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G04890.11e-167HD-ZIP family protein