PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.783 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 222aa MW: 25212 Da PI: 8.646 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 103.1 | 1.5e-32 | 43 | 143 | 1 | 95 |
EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkeg 77 f+k ltpsdv+k++rlv+pk++ae++ g++ e++ l++ede g++We++++y+ +s++yvltkGW++Fvk+++L++g evm.model.AsparagusV1_02.783 43 FEKPLTPSDVGKLNRLVIPKQHAEKYfpldGESGEKGSLLSFEDELGKQWEFRYSYWTSSQSYVLTKGWSKFVKDKKLDAG 123 99***************************9555557779****************************************** PP -EEEEEE-.SS.SEE..EEE CS B3 78 DfvvFkld.gr.sefelvvk 95 D+v+F++ g+ +++++++ evm.model.AsparagusV1_02.783 124 DVVIFQRFrGHgTDERFYID 143 ******55244455555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MNQLAQNPSN PWIWQPTMNA HNPHYSQMHR QQQEGTYIKE PMFEKPLTPS DVGKLNRLVI 60 PKQHAEKYFP LDGESGEKGS LLSFEDELGK QWEFRYSYWT SSQSYVLTKG WSKFVKDKKL 120 DAGDVVIFQR FRGHGTDERF YIDSRRRGSI EANSRVVARP DAENPWSSCA SPHGYMNSVN 180 SGQQASSSTR GSSRRLRLFG VNLECGPDPA EPEHLASGSW N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06250.1 | 1e-51 | B3 family protein |