PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.743
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 265aa    MW: 29308.2 Da    PI: 7.7324
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.743genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH45.21.7e-1483130455
                                   HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +h   Er RR+++++ f++L el+P++   p  K +K++i+ +Av YIksLq
  evm.model.AsparagusV1_02.743  83 MHILTERERRKKMRNMFSNLHELIPHL---P-SKADKSTIVDEAVTYIKSLQ 130
                                   79999*********************6...3.8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MSDEGGANGA KASFLCPESD QPWSFSNFDN SGSDHQNIVV LGSKPNSPIV GLKIDGDQEK  60
TEGKINGSSS SKGKGEASDD HEMHILTERE RRKKMRNMFS NLHELIPHLP SKADKSTIVD  120
EAVTYIKSLQ QTLQNLQQQK LERMQVQASS SSSLFPPVLR TPQSQAINNS RESFLATAPM  180
SPTLMPMPRL SNSFQAWSTD NAMLNVSGEH AHISISTVKK PGTLANIFYI MEKYKLEVLL  240
CTVSSDYFRS MYMIHARMPK GLEL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49770.14e-38bHLH family protein