PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.672
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 218aa    MW: 24904.2 Da    PI: 8.3344
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.672genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.51.7e-194993147
                                  TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                                  rg++T+eEdel+++++++lG++ W++Ia +++ gRt++++k++w+++
  evm.model.AsparagusV1_02.672 49 RGNFTEEEDELIIKLHELLGNK-WSLIAGKLP-GRTDNEIKNYWNTH 93
                                  89********************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 218 aa     Download sequence    
MLLPTFADEK EQFNPSHLAL FILRXXXXLR CGKSCRLRWI NYLRPDLKRG NFTEEEDELI  60
IKLHELLGNK WSLIAGKLPG RTDNEIKNYW NTHIKRKLLS RGLDPQTHRP LNGSLRHKHQ  120
EIISIMSAEH NNTAKPSSPE SSADGDRCRE LDLNLSISLP DHHGQSPTSR ASRTNYDRAT  180
CFCCSLGLQN SEACNCKVMR SPDVLRYCRE LEDGYNG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.12e-59MYB family protein