PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.591 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ARF | ||||||||
Protein Properties | Length: 700aa MW: 77903.1 Da PI: 5.9654 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 71.5 | 1.1e-22 | 126 | 226 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangL 74 f+k+lt sd++++g +++ +++a+e+ ++++ ++l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L evm.model.AsparagusV1_02.591 126 FCKTLTASDTSTHGGFSVLRRHADEClpqldmsQHPP--WQELIATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRL 204 99****************************9654444..458*************************************** PP -TT-EEEEEE-SSSEE..EEEEE- CS B3 75 kegDfvvFkldgrsefelvvkvfr 98 +gD ++F + +++el+v+v+r evm.model.AsparagusV1_02.591 205 VAGDAFIFL--RGENGELRVGVRR 226 *********..449999*****97 PP | |||||||
2 | Auxin_resp | 105.9 | 4.6e-35 | 252 | 334 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrs 81 a+ha+st++ F+v+Y+Pr+s+seF+++v+++++a ++++svGmRfkm+fe+++++err+sGt+v v d +rW++S+Wrs evm.model.AsparagusV1_02.591 252 ASHAISTGTLFSVFYKPRTSRSEFIISVNRYLEAKSQRLSVGMRFKMRFEGDEAPERRFSGTIVEVDDPGLSRWTDSEWRS 332 789****************************************************************************** PP Auxin_resp 82 Lk 83 Lk evm.model.AsparagusV1_02.591 333 LK 334 96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 700 aa Download sequence |
MALAGSNHQS GARLGASVDL LYKELWHACA GPLVTVPREG ERVYYFPQGH MEQLEASTHQ 60 GLDQQMPLFN LPSKILCRVM HVQLRAEADS DEVYAQITLL PEPDQGEITS PDPLLPEPEK 120 CTIHSFCKTL TASDTSTHGG FSVLRRHADE CLPQLDMSQH PPWQELIATD LHGNEWHFRH 180 IFRGQPRRHL LTTGWSVFVS SKRLVAGDAF IFLRGENGEL RVGVRRLMRQ LNNMPSSVIS 240 SHSMHLGVLA TASHAISTGT LFSVFYKPRT SRSEFIISVN RYLEAKSQRL SVGMRFKMRF 300 EGDEAPERRF SGTIVEVDDP GLSRWTDSEW RSLKVQWDEP SSIVRPDKVS PWEVEPLVAS 360 PPPASQPVQR NKRARPPISP SSAPDLPSHF GMWKPQTDTT KTFSFSRLQR NSESYPFSTP 420 SPLFSPTSKP SSVGFNGNTT PSLIPTSPGS AGFNGSSGPL SMYWPSRADS QTESFSASIT 480 KEPTRKKQES NSGNSCRLFG ILLESSTTAE ESSPVATTSV VAEDQPLASQ DFDSEQQSHP 540 SNANHSDVPA VSSEPEKSCL RSPQETQSRQ LRSCTKVHMH GMAVGRAVDL TRFDGYEDLL 600 HKLEEMFSIE GELTSAVKKW QVVYTDDEDD MMLVGDDPWN EFCNIVRKIY ICTCEEAKQL 660 SPKSKLPIFK GEGISDNSDA DATRNDYDDQ PKDLQDKDS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.2 | 0.0 | ARF family protein |