PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.583
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family NAC
Protein Properties Length: 280aa    MW: 31378 Da    PI: 6.8538
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.583genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM166.21.1e-51111401129
                           NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvka...eekewyfFskrdkkyatgkrknrat 78 
                                   +ppGfrFhPtdeel+ +yLkkk+ ++k++l evik+vd++k+ePw+L++k+k     +++wy Fs++d+ky+tg+r+nrat
  evm.model.AsparagusV1_02.583  11 VPPGFRFHPTDEELLLFYLKKKLCSEKFDL-EVIKDVDLNKIEPWELQEKCKIgatPQNDWYLFSHKDRKYPTGSRTNRAT 90 
                                   69****************************.99**************964444222455********************** PP

                           NAM  79 ksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                                   ++g+Wkatg+dk + + + +++g++ktLvfy+grap+g+ktdW+mheyrle
  evm.model.AsparagusV1_02.583  91 NAGFWKATGRDKCIRT-SYKKIGMRKTLVFYRGRAPHGQKTDWIMHEYRLE 140
                                   ***************9.8999****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MDSASSSSPG VPPGFRFHPT DEELLLFYLK KKLCSEKFDL EVIKDVDLNK IEPWELQEKC  60
KIGATPQNDW YLFSHKDRKY PTGSRTNRAT NAGFWKATGR DKCIRTSYKK IGMRKTLVFY  120
RGRAPHGQKT DWIMHEYRLE EADDDQDAAA AMSTQTSTID APAYTTTAAP QMTHDQSRPE  180
LYSPNFHPHL PSQTSTFYKP DISLHQYSHQ LPPTNPYSGA QLQDLLPNPR PSTGYDFDGL  240
GVVGVNGGCE QIHQNVEGGS NWGPVDSKGG QMDLWGYGK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G10350.19e-79NAC family protein