PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.565

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Nin-like

Protein Properties

Length: 814aa MW: 90378.5 Da PI: 6.2264

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.565	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	92	4.6e-29	507	557	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isl+ l+kyFs+++kdAAk++gvc+T+LKriCRq+GI+RWP+Rki+++ evm.model.AsparagusV1_02.565 507 EKNISLSILQKYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKV 557 89***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 814 aa Download sequence
MDGFNPMDCG DDPFNLSALL SLDNYPELCS PLDYAAPPYS YSAFQQISSN WASSDIDTLA 60 SASANASDES MISIIPKYMP NNSLAERLLR ALSLFKESSG GGILAQVWMP MKHSNGYILS 120 TSEQPFLLDQ ILAGYREVSR AFTFSVEEAP SSFPGLPGRV FISGLPEWTS NVVYYNNLEY 180 LRGEYALVHK VRGSLALPIF YPKERSCCAV LELVTTKEKT DFDMEMDSVC NALQAVELRS 240 IKGQIYQQPP TKKQKSAFNE ILDVLRACCH AHMLPLALTW IPFDSTKEVV CELNSSLSKK 300 NLLYVEESAC YVNDTRMKGF VHACVEHCLE KEQGIAGKAL LSNHPFFSPD VKSYNIREYP 360 LAHHARKYGL NAAVAIRLRS TLTGDDDYIL EFFLPLNCRG SSEQQELLNN LSSTMQRICR 420 SLRTVSDAEV VISDSLKRDI HKQAGNNSSS PEISIKNSQQ MDSDNEVFTD FAIEDPNKKL 480 SEQGDANSEQ FKSGSSRQPE KKRSTTEKNI SLSILQKYFS GSLKDAAKSI GVCPTTLKRI 540 CRQHGISRWP SRKINKVNRS LKKIQTVIDS VQGVEGALKY DPTSRCLVAS VSTEKSNTTS 600 LEKFKTFEQV TAKSSNLMGI DDINTKTDTD TIKEHSHPTY SSMTDSSSGS ASSIPTFQKN 660 SNDKVLAYDI DNGSAITVKA TYREDTVRFK FIPIMGCLQL LEEIGKRYKL SIGTFQLKYM 720 DDEEEWVMLS SDADLLECVE VLESIGSRNL KLLVRDVQCR VIYLGLRPEP EPVSGPDPAK 780 LELGPGTGKA RILKLNRAPD PSSSRLVEDG RAG*

Sequence ? help Back to Top

Protein Sequence Length: 814 aa Download sequence

MDGFNPMDCG DDPFNLSALL SLDNYPELCS PLDYAAPPYS YSAFQQISSN WASSDIDTLA  60
SASANASDES MISIIPKYMP NNSLAERLLR ALSLFKESSG GGILAQVWMP MKHSNGYILS  120
TSEQPFLLDQ ILAGYREVSR AFTFSVEEAP SSFPGLPGRV FISGLPEWTS NVVYYNNLEY  180
LRGEYALVHK VRGSLALPIF YPKERSCCAV LELVTTKEKT DFDMEMDSVC NALQAVELRS  240
IKGQIYQQPP TKKQKSAFNE ILDVLRACCH AHMLPLALTW IPFDSTKEVV CELNSSLSKK  300
NLLYVEESAC YVNDTRMKGF VHACVEHCLE KEQGIAGKAL LSNHPFFSPD VKSYNIREYP  360
LAHHARKYGL NAAVAIRLRS TLTGDDDYIL EFFLPLNCRG SSEQQELLNN LSSTMQRICR  420
SLRTVSDAEV VISDSLKRDI HKQAGNNSSS PEISIKNSQQ MDSDNEVFTD FAIEDPNKKL  480
SEQGDANSEQ FKSGSSRQPE KKRSTTEKNI SLSILQKYFS GSLKDAAKSI GVCPTTLKRI  540
CRQHGISRWP SRKINKVNRS LKKIQTVIDS VQGVEGALKY DPTSRCLVAS VSTEKSNTTS  600
LEKFKTFEQV TAKSSNLMGI DDINTKTDTD TIKEHSHPTY SSMTDSSSGS ASSIPTFQKN  660
SNDKVLAYDI DNGSAITVKA TYREDTVRFK FIPIMGCLQL LEEIGKRYKL SIGTFQLKYM  720
DDEEEWVMLS SDADLLECVE VLESIGSRNL KLLVRDVQCR VIYLGLRPEP EPVSGPDPAK  780
LELGPGTGKA RILKLNRAPD PSSSRLVEDG RAG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	0.0	Nin-like family protein