PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.451
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 292aa    MW: 33198.6 Da    PI: 5.4728
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.451genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH30.66e-10100142754
                                   HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                           HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    +Er RR+r+++++  Lr+l+P+      +K++Ka+i   A+ Y++sL
  evm.model.AsparagusV1_02.451 100 VAERSRRSRMKEKLYALRSLVPNI-----TKMDKASIIGDAIVYVQSL 142
                                   68*********************7.....7****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MDHPQLFFST QTYLHSNDGF DPIIWNTNQG FGGFELPETS VLDNVLDFGI DLPTDAMGES  60
PASYNLSLEE EEEDRKQNYD EGSSSRKRMK CKRDRSKTLV AERSRRSRMK EKLYALRSLV  120
PNITKMDKAS IIGDAIVYVQ SLKDQAKKLA DEISFLGSSP TSREDQMFFR VPIDNLRAKQ  180
TEECYDKKKK QFGGEMLNVM AHEVGEGTFY LRMDCNKRDG AVSALYSAIE SFECFHVQNS  240
DLSFHCDRFM LTLTLDVKGT EKMMMSASSL KLWVISALVK EGFGFEMHQS I*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18793KRMKCKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28160.11e-47bHLH family protein