PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.425 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 251aa MW: 28825.3 Da PI: 5.1172 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 54.7 | 1.7e-17 | 68 | 121 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe +++ e++ eLA+ lgL+ rq+ +WFqNrRa++k evm.model.AsparagusV1_02.425 68 KKRRLNLEQVRTLERNFELGNKLEPERKMELARALGLQPRQIAIWFQNRRARWK 121 4557899**********************************************9 PP | |||||||
2 | HD-ZIP_I/II | 123.2 | 1.3e-39 | 67 | 158 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLe 81 ekkrrl+ eqv++LE++Fe +kLeperK+elar+Lglqprq+a+WFqnrRAR+ktk+lEkdy+ L+r+++ +keen++L+ evm.model.AsparagusV1_02.425 67 EKKRRLNLEQVRTLERNFELGNKLEPERKMELARALGLQPRQIAIWFQNRRARWKTKKLEKDYDELRRELEVVKEENDALQ 147 69******************************************************************************* PP HD-ZIP_I/II 82 keveeLreelk 92 +++++L++el evm.model.AsparagusV1_02.425 148 EHNKKLKAELL 158 *******9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 251 aa Download sequence |
MACNGIPSSF FPQNFMYQLQ SQMEESHPLL PIATMPQDFR GILKSPLSFD EMGVEDELSD 60 DCSQAGEKKR RLNLEQVRTL ERNFELGNKL EPERKMELAR ALGLQPRQIA IWFQNRRARW 120 KTKKLEKDYD ELRRELEVVK EENDALQEHN KKLKAELLSL KGRGGTEPII NLNKETEGSS 180 SNRSTENSSD INLDISKSPP NPNQAIAYQF LHCPKTENGI AIGQEENFCN IFGVEDQSAF 240 WAWSEQQHFH * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69780.1 | 2e-70 | HD-ZIP family protein |