PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.422 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 260aa MW: 29582.8 Da PI: 5.4593 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 23 | 1.6e-07 | 114 | 160 | 20 | 59 |
S-EEEEEE-ST...T---EEEEEE-S....SSTTEEEEEEES--SS- CS WRKY 20 fprsYYrCtsa...gCpvkkkversa....edpkvveitYegeHnhe 59 r+YY+C++ gCp+kk v+++a +d + + Y +H+++ evm.model.AsparagusV1_02.422 114 RRRNYYKCAHFkgqGCPAKKTVQQKAynenDDAPKFRVSYIMQHTCK 160 569******977889********8752222677899********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence |
MVSSHNQTHW QQENKRRSLK MEPSNRTGVV IEKINHTKEI VVQLRALQLP LGVTDSSSEL 60 ARDLFDEAIR SLTSASLELR TATLPVEFKA SDEDDGRMNL SKRKRRRRPS EDDRRRNYYK 120 CAHFKGQGCP AKKTVQQKAY NENDDAPKFR VSYIMQHTCK NFETNSKPIT SDMGCEFMIN 180 QEDESNASSS PNKSQNNDEA LSAITAEFTE LLHSSPKEQE ATTSATGNWE EMFGFGGGDG 240 MAWDYEAMIN EFFWSFVEE* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 102 | 107 | KRKRRR |
2 | 102 | 108 | KRKRRRR |
3 | 102 | 116 | KRKRRRRPSEDDRRR |
4 | 103 | 107 | RKRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.2 | 9e-08 | WRKY family protein |