PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.380 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | WRKY | ||||||||
Protein Properties | Length: 197aa MW: 21958.6 Da PI: 8.6695 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 79.4 | 3.8e-25 | 59 | 120 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 l+Dg++WrKYGqK++ +++fprsY+rC ++ gC+++++v++s++dp+ +++tY g+H+++ evm.model.AsparagusV1_02.380 59 LNDGHSWRKYGQKKIFNAKFPRSYFRCPHKydqGCKATRQVQQSEQDPSRFTVTYFGQHTCR 120 58***************************99999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 197 aa Download sequence |
MVSFHSALKA LQDSGVKSQK HKRNENPLQI GRIQSAHAPG GQKTRSLPYS YTLTKSKSLN 60 DGHSWRKYGQ KKIFNAKFPR SYFRCPHKYD QGCKATRQVQ QSEQDPSRFT VTYFGQHTCR 120 DPFEVASSCI EEDPCTINFA SPSEFDANFE QPQLSTLKQG DSCEDVVGNT ATPGSSLSNC 180 FKFPEFGLSE MLSLLA* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-28 | WRKY family protein |