PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.32 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 172aa MW: 19969.8 Da PI: 7.6276 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.5 | 6.2e-20 | 72 | 125 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t++q++ Le+ Fe ++++ e++ +LAk lgL+ rqV +WFqNrRa++k evm.model.AsparagusV1_02.32 72 KKRRLTSTQVQFLEKSFEIENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWK 125 56789************************************************9 PP | |||||||
2 | HD-ZIP_I/II | 119.9 | 1.3e-38 | 71 | 144 | 1 | 74 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalk 74 ekkrrl++ qv++LE+sFe e+kLeperK +la++Lglqprqva+WFqnrRAR+ktkq+Ekdye+Lk+++d l+ evm.model.AsparagusV1_02.32 71 EKKRRLTSTQVQFLEKSFEIENKLEPERKIQLAKDLGLQPRQVAIWFQNRRARWKTKQIEKDYEVLKKSFDVLM 144 69*********************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 172 aa Download sequence |
MGVLLQNEGI SSEAFQALIF SSSSHTGFCG SKSMLNFEEI CHSTSNQPFY HPREPEETFD 60 DHYDESLHQP EKKRRLTSTQ VQFLEKSFEI ENKLEPERKI QLAKDLGLQP RQVAIWFQNR 120 RARWKTKQIE KDYEVLKKSF DVLMLSPFEF VPLLAISIPS KPRMISDGFK K* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 120 | 128 | RRARWKTKQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G01470.1 | 6e-40 | HD-ZIP family protein |