PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.281 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 324aa MW: 36785.4 Da PI: 6.9134 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.3 | 1.5e-32 | 62 | 115 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH +Fv+ave+LGG+++AtPk +l+lm+vkgL+++hvkSHLQ+YR+ evm.model.AsparagusV1_02.281 62 PRLRWTPDLHLCFVHAVERLGGQDRATPKLVLQLMNVKGLSIAHVKSHLQMYRS 115 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.6 | 2.1e-16 | 63 | 114 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +v+av++lGg t+k++ + m+ kg++ ++ks++q+y+ evm.model.AsparagusV1_02.281 63 RLRWTPDLHLCFVHAVERLGGQdraTPKLVLQLMNvKGLSIAHVKSHLQMYR 114 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 324 aa Download sequence |
MGSKSSENST YNPSSDKDEE EEEDQEGTPR NGGSSSNSTV DESERKASSG GSVRQYNRSK 60 TPRLRWTPDL HLCFVHAVER LGGQDRATPK LVLQLMNVKG LSIAHVKSHL QMYRSKKIDD 120 SGQVIGESRN ELGRDQYVTN LRQLPMLHGI QQRSFTNSRY GSVSSWSTSH GYWMHNRLLD 180 RANSATIGSR VYDSTAEMIF GRCNRYRDFQ MERSMLNRAN SEGFNEPSTA FEWLNDHKFG 240 STVKRSLHDE HDKGLDLDLS LNIGSKKARR ERNCEEEEEV DSRLSLSLFP PSRQEKCSRD 300 IEKDSKVSNE EHERGTSTLD LTI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 2e-47 | G2-like family protein |