PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.270 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 180aa MW: 20063.3 Da PI: 8.8993 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 34.1 | 4.9e-11 | 60 | 101 | 8 | 54 |
HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + r+RR+ri ++f L++l+P K++ +++Le+A++Y+ksL evm.model.AsparagusV1_02.270 60 AARQRRNRISDRFRILKSLVPGG-----SKMDTVSMLEEAINYVKSL 101 569******************95.....5****************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 180 aa Download sequence |
MESYNYQQNP SPLLLTEEQN SSSSTSRRKT LTHDHPHERK PRNAKTRSTA KLSTDPQSVA 60 ARQRRNRISD RFRILKSLVP GGSKMDTVSM LEEAINYVKS LKAQIWLHQA EISMNLNEGS 120 NLNFPTTYYY SNDDGVNFQS EEMVGGSVSP SSPTLAPLPY CSFGGGGQEV NPSFSMTYY* |