PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.244
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family S1Fa-like
Protein Properties Length: 81aa    MW: 8741.56 Da    PI: 10.7332
Description S1Fa-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.244genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1S1FA119.21.6e-371680670
                          S1FA  6 veakGlnPGlivllvvgglllvflvgnyilyvyaqknlPPrkkkPvskkklkreklkqGvavPGe 70
                                  + a+GlnPG++vllvv glll+f+vgny+lyvyaqk+lP +kkkP+skkk+k+e+lk+Gv++PGe
  evm.model.AsparagusV1_02.244 16 ERAQGLNPGVLVLLVVVGLLLLFFVGNYALYVYAQKTLPLKKKKPISKKKMKKERLKKGVSAPGE 80
                                  5679************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 81 aa     Download sequence    
MANQFVDGGG NVIIDERAQG LNPGVLVLLV VVGLLLLFFV GNYALYVYAQ KTLPLKKKKP  60
ISKKKMKKER LKKGVSAPGE *