PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.220
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 400aa    MW: 44932.8 Da    PI: 8.5212
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.220genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.72.2e-32166222360
                                   -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 
                                   DgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers  d+++ ei+Y+geHnh+k
  evm.model.AsparagusV1_02.220 166 DGYNWRKYGQKQVKGSEYPRSYYKCTHPSCPMKKKVERSF-DGNIAEIVYKGEHNHPK 222
                                   9***************************************.***************85 PP
2WRKY99.52.1e-31325381359
                                   -SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
                          WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                                   Dg++WrKYGqK vkg+++prsYYrC+  +C+v+k++er  ++p+ ++itYegeHnhe
  evm.model.AsparagusV1_02.220 325 DGFRWRKYGQKIVKGNPYPRSYYRCSNLKCNVRKHIERVLDEPTSFIITYEGEHNHE 381
                                   9*******************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    
MHNAEKTIVI KPVPSRPFSS YRSFSDLVDG TINRSLTADD KIPAIKPKTV RFRPSSSNSL  60
PSRPDVSEAA SRFTSDKASA TTSEAVNEAP SIYKPMAESV SKNYDSLMEN YMVNDVGHQK  120
TSVDDELQLQ DINPENYLVQ NQITSSFQHN SPSLVATREQ DRQSCDGYNW RKYGQKQVKG  180
SEYPRSYYKC THPSCPMKKK VERSFDGNIA EIVYKGEHNH PKPQPAKRLA AVSEEQSFVN  240
NNNNNIGNNL LGSSHDSFIG TTLSHYDGTP DLSGVCSGIE NDNERHKSKK RKHKKRVNVE  300
EAASQFVGDP EPLMQASTES TITGDGFRWR KYGQKIVKGN PYPRSYYRCS NLKCNVRKHI  360
ERVLDEPTSF IITYEGEHNH EMPDRTTNSA AQINILSAE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13960.21e-61WRKY family protein