PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.21
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB
Protein Properties Length: 271aa    MW: 30146.8 Da    PI: 9.7256
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.21genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding31.83.4e-103077247
                                 SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding  2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                                 g+WT++E +++ +a +   ++   +W+++a++++ g+t  +++s++ ++
  evm.model.AsparagusV1_02.21 30 GSWTQQENKIFENALAHVDSKtpdRWERVAAMIP-GKTVRDVVSHYKDL 77
                                 89********************************.***********875 PP

2Myb_DNA-binding48.42.1e-15131175347
                                  SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
              Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                  +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
  evm.model.AsparagusV1_02.21 131 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 175
                                  8*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    
MMTRSGMEVL SPASSYFTSS SWILGEKRSG SWTQQENKIF ENALAHVDSK TPDRWERVAA  60
MIPGKTVRDV VSHYKDLEAD VNHIEAGLIP FPGYSSPSFV LDWEGGFDGL KQKRPGGGGR  120
FSDQERKKGV PWTEEEHKLF LMGLKKYGKG DWRNISRNFV VTRTPTQVAS HAQKYFIRLN  180
SGGKDKRRAS IHDITTVNLP ETSPSSSPSQ PSALTMQSTS STATERSDQN DQASCFSSSF  240
RQLPFGVDPY GIKLEAHQNH HTVAHRAMLI *
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-95MYB_related family protein