PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.21 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 271aa MW: 30146.8 Da PI: 9.7256 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.8 | 3.4e-10 | 30 | 77 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47 g+WT++E +++ +a + ++ +W+++a++++ g+t +++s++ ++ evm.model.AsparagusV1_02.21 30 GSWTQQENKIFENALAHVDSKtpdRWERVAAMIP-GKTVRDVVSHYKDL 77 89********************************.***********875 PP | |||||||
2 | Myb_DNA-binding | 48.4 | 2.1e-15 | 131 | 175 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE++l++ + k++G+g+W+ I+r + +Rt+ q+ s+ qky evm.model.AsparagusV1_02.21 131 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 175 8*******************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 271 aa Download sequence |
MMTRSGMEVL SPASSYFTSS SWILGEKRSG SWTQQENKIF ENALAHVDSK TPDRWERVAA 60 MIPGKTVRDV VSHYKDLEAD VNHIEAGLIP FPGYSSPSFV LDWEGGFDGL KQKRPGGGGR 120 FSDQERKKGV PWTEEEHKLF LMGLKKYGKG DWRNISRNFV VTRTPTQVAS HAQKYFIRLN 180 SGGKDKRRAS IHDITTVNLP ETSPSSSPSQ PSALTMQSTS STATERSDQN DQASCFSSSF 240 RQLPFGVDPY GIKLEAHQNH HTVAHRAMLI * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G58900.1 | 3e-95 | MYB_related family protein |