PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1982

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

G2-like

Protein Properties

Length: 321aa MW: 35929.6 Da PI: 9.4139

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1982	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.8	1e-32	99	153	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l++m+v+g+t++hvkSHLQkYRl evm.model.AsparagusV1_02.1982 99 KQRLRWTSDLHDRFVDAIAQLGGPDRATPKGVLRVMGVPGITIYHVKSHLQKYRL 153 79****************************************************8 PP
2	Myb_DNA-binding	54.2	3.4e-17	101	152	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++++vda++qlGg+ t+k + r mg g t +++ks++qky+ evm.model.AsparagusV1_02.1982 101 RLRWTSDLHDRFVDAIAQLGGPdraTPKGVLRVMGvPGITIYHVKSHLQKYR 152 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 321 aa Download sequence
MMGMRGILSR LYLVYFSMSR KEFQFRARDI RRRMEWMKGE LVPFEDVVDD QSITMYHAKK 60 FSTMPLVPHR AQATEQPPDT GVMVGNTVNN ATNSGGSGKQ RLRWTSDLHD RFVDAIAQLG 120 GPDRATPKGV LRVMGVPGIT IYHVKSHLQK YRLAKYLPES PGDGSKDEKK DLGETSSGTE 180 SAGGIQINEA LKMQMEVQKR LHEQLEVQRQ LQLRIEDQGK YLQKIIEEQQ KLGGVLQASE 240 DKQKPCNSPS TSQDLPSSPH KKARVGDLPR DPLHNSHPSG SQESKPSLIP QWDQDLYGQP 300 SFEQQQMSVG TTSRGSELSS *

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	1e-54	G2-like family protein