PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_02.1902

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

bHLH

Protein Properties

Length: 1091aa MW: 123192 Da PI: 4.855

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_02.1902	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	12	0.0004	31	50	12	30
HHHHHHHHHHHHHCTSCC.C CS HLH 12 RRdriNsafeeLrellPk.a 30 RR+r+N+ +++L++ lP + evm.model.AsparagusV1_02.1902 31 RRRRMNDELQRLKDALPRiR 50 9****************854 PP

Sequence ? help Back to Top
Protein Sequence Length: 1091 aa Download sequence
MVVVGDVIAS KIIEKLVEVG FDYAADQFFA RRRRMNDELQ RLKDALPRIR AVVNAAESGQ 60 GEITGDLNKW LWQLKGAVYM ASDVLDDLDY NEIQKRVETD AAGSGPRGSK VSGFISDSKR 120 RVSKFSKRAF KSDPTLEKLR GAVKRLSEVA AGVEVFNSLV TERNQQQQQQ QQQEQLRETG 180 PIVRERDVLG RDGDTKEVLQ WLLWAPIANE DHEGISLFSI EGLGGVGKTT LAQVVYGDDT 240 LQSSFGIKIW VCVSTRFDVK KITGDILECA AQRRPDVGGL GPLQEALEAL VSSKKFLLVL 300 DDVWNDDDLS SWQTLFAPLR CGLKGSKIIL TARSEEVAEM ATLALGGMAN ESMKLKPLDG 360 NDFLSLFNRY AFAGTNPHNH GKLQSIGEQI AGRLGGLPLA AKTIGALLRS NLDDSHWTNI 420 LQSSRISDHG PQRDGVMPAL MLSYYYLPKH LRPCFAFLST FPQDHRFLKS DLVLMWMALG 480 FIQQSPQNLA QAPEDIGSRY FDELAKLTFL EDELAKLTFL EQYDSWINPS TQYDSWINPS 540 TQGREEEYIM HDLLHDLSSK VSHGECFTFV GDTSINQIPN TVRHLYFETG DLDLLKDMDK 600 WKNLHTLILK FNGYNDEHAV AFRQVFESLE SIRVLRITIE EMEVLPCAIG KLRHLRYLSV 660 DRGFTRLPSS ICKLYHLQVL ACSSIATSPV LVLNNLINLR HLLPNHIPYG NIDGIGTLTS 720 LQGLSLRAGA YNKLSELKDL RELQELRISG LRNQRHDEEV SLVQLHDKKR LQVLHLDWND 780 DSDAAEEYEK VLDCLHPPDS LKELEIARSM KRDSKCYVWN GMMIVMQQRS LVLNDIEPLV 840 IDLDGGNSSD ESCNWQLADE IINNDLEYSH CLDDVMQEFS QANGYMTSQG YNLSLGEGLH 900 FGQGVRVPPR PVYVPKWRPD NYYSHKRGLG YTSLSDDEYG QQIISQLINK SGHSSDASTW 960 DSDVSIGERF KALMLNMATV DPSTTEEDDQ LPIWEDPWMH YMNIQYGDRF EQREPPTEDK 1020 VVQVNMGDEA NPKPIFISGD LPADEKEELI ALIREYIDVF AWNYEDMPGL DPDVAMHSLN 1080 IKPDVKPVKQ *

Sequence ? help Back to Top

Protein Sequence Length: 1091 aa Download sequence

MVVVGDVIAS KIIEKLVEVG FDYAADQFFA RRRRMNDELQ RLKDALPRIR AVVNAAESGQ  60
GEITGDLNKW LWQLKGAVYM ASDVLDDLDY NEIQKRVETD AAGSGPRGSK VSGFISDSKR  120
RVSKFSKRAF KSDPTLEKLR GAVKRLSEVA AGVEVFNSLV TERNQQQQQQ QQQEQLRETG  180
PIVRERDVLG RDGDTKEVLQ WLLWAPIANE DHEGISLFSI EGLGGVGKTT LAQVVYGDDT  240
LQSSFGIKIW VCVSTRFDVK KITGDILECA AQRRPDVGGL GPLQEALEAL VSSKKFLLVL  300
DDVWNDDDLS SWQTLFAPLR CGLKGSKIIL TARSEEVAEM ATLALGGMAN ESMKLKPLDG  360
NDFLSLFNRY AFAGTNPHNH GKLQSIGEQI AGRLGGLPLA AKTIGALLRS NLDDSHWTNI  420
LQSSRISDHG PQRDGVMPAL MLSYYYLPKH LRPCFAFLST FPQDHRFLKS DLVLMWMALG  480
FIQQSPQNLA QAPEDIGSRY FDELAKLTFL EDELAKLTFL EQYDSWINPS TQYDSWINPS  540
TQGREEEYIM HDLLHDLSSK VSHGECFTFV GDTSINQIPN TVRHLYFETG DLDLLKDMDK  600
WKNLHTLILK FNGYNDEHAV AFRQVFESLE SIRVLRITIE EMEVLPCAIG KLRHLRYLSV  660
DRGFTRLPSS ICKLYHLQVL ACSSIATSPV LVLNNLINLR HLLPNHIPYG NIDGIGTLTS  720
LQGLSLRAGA YNKLSELKDL RELQELRISG LRNQRHDEEV SLVQLHDKKR LQVLHLDWND  780
DSDAAEEYEK VLDCLHPPDS LKELEIARSM KRDSKCYVWN GMMIVMQQRS LVLNDIEPLV  840
IDLDGGNSSD ESCNWQLADE IINNDLEYSH CLDDVMQEFS QANGYMTSQG YNLSLGEGLH  900
FGQGVRVPPR PVYVPKWRPD NYYSHKRGLG YTSLSDDEYG QQIISQLINK SGHSSDASTW  960
DSDVSIGERF KALMLNMATV DPSTTEEDDQ LPIWEDPWMH YMNIQYGDRF EQREPPTEDK  1020
VVQVNMGDEA NPKPIFISGD LPADEKEELI ALIREYIDVF AWNYEDMPGL DPDVAMHSLN  1080
IKPDVKPVKQ *