PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1894 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | NAC | ||||||||
Protein Properties | Length: 157aa MW: 17855.3 Da PI: 4.9882 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.4 | 3.3e-24 | 35 | 156 | 1 | 124 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekew.yfFskrdkkyatgkrknratk 79 lp Gf FhPt + ++ ++L++kv g +l++ + ike+d+y +eP +Lp +++ ++++w yfF+ + +++ r+t evm.model.AsparagusV1_02.1894 35 LPLGFLFHPTGDVVIRHFLRNKVLGAPLPI-NPIKEIDVYLFEPDELPITISDSDERWmYFFVYMTE-----ENSDRSTP 108 699***************************.88***************8888888999788876655.....56799*** PP NAM 80 sgyWkatgkdkevlsk.kgelvglkktLvfykg.rapkge.ktdWvmh 124 +gyWk +d+ +++ ++e +glk+t+++y++ p+g+ k +W+m+ evm.model.AsparagusV1_02.1894 109 KGYWKLDVSDELIKDPdTKEIIGLKNTFIYYRKeLGPNGRyKIKWTMQ 156 **************9967778**********6535677765999*996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 157 aa Download sequence |
MDSSSSSSPA VPSSPPSKSP SPLLPYNEDG THPCLPLGFL FHPTGDVVIR HFLRNKVLGA 60 PLPINPIKEI DVYLFEPDEL PITISDSDER WMYFFVYMTE ENSDRSTPKG YWKLDVSDEL 120 IKDPDTKEII GLKNTFIYYR KELGPNGRYK IKWTMQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G33060.2 | 1e-19 | NAC family protein |