PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1658 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | ERF | ||||||||
Protein Properties | Length: 262aa MW: 28373.2 Da PI: 6.3731 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 62.8 | 7.4e-20 | 85 | 134 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae Aa a+++a+++++g evm.model.AsparagusV1_02.1658 85 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAVAYDQAALRFKG 134 7********.**********94....45***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 262 aa Download sequence |
MGSKRPLPCD EQEEREENMS SFSRYSSSRA EQDASAMVSA FAHVISASSG EVEAENTAAS 60 LPEAHKEAAV KPDLEEQGAT TMRRHYRGVR QRPWGKWAAE IRDPKKAARV WLGTFDTAEA 120 AAVAYDQAAL RFKGTKAKLN FPERVQGRTD LSFLLTRGIP TEVPATNLSQ VSYPNLLQYA 180 QLLQSGRDED LSNVASGLYC TGKSLQFSSS SGTKVEGSNS SEEFLDFSLP HAAGSVSSSS 240 SSWSGHGDQK DKDRGGKQKD N* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-36 | ERF family protein |