PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1641
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family WRKY
Protein Properties Length: 315aa    MW: 35860.4 Da    PI: 7.2615
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1641genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.61.7e-30200257359
                                    -SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
                           WRKY   3 DgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                                    Dg++WrKYGqK+ kg+++pr+YYrCt + gCpv+k+v+r+ ed +++++tYeg+Hnh+
  evm.model.AsparagusV1_02.1641 200 DGCQWRKYGQKVAKGNPCPRAYYRCTVEpGCPVRKQVQRCMEDMSILITTYEGTHNHP 257
                                    9**************************99****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MSMKKERKIH IDLSLTLQEE EKEDANEEDH HTHNLEEEQA KEIGEKGEEK STQDNNLMID  60
EEVKLRVKIN RMKEENTQLQ KIIDCTMKDY YDLQTKFVAI QKRDQREYDK HGKNGYNEHK  120
RVHDEIDESS QFKLGLSLGL QTQVEQIEKE TSDGEKGIRR WTNDDTNRIK TNELAAMINP  180
ANRKTRVSIR TRCQGPTMID GCQWRKYGQK VAKGNPCPRA YYRCTVEPGC PVRKQVQRCM  240
EDMSILITTY EGTHNHPLPV GATAMPSTTT ASAAAAATIA CGSYGYAFDY NSISSGSGHS  300
KVPVIIFRLK FIVP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68150.14e-59WRKY family protein