PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.1606
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 283aa    MW: 31236.4 Da    PI: 7.5317
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.1606genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.51.3e-09143190455
                                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                            HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                    +h+ +Er RR+ri +++ +L+ l+P +    +k   Ka +L + ++Y++sLq
  evm.model.AsparagusV1_02.1606 143 SHSLAERVRRERISERMKKLQGLVPGC----DKVTGKALVLDEIINYVQSLQ 190
                                    8*************************9....555*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 283 aa     Download sequence    
MEAFLYHHQC PLFLDPIEIS LLPHQQNGEQ SNASSSCLIT GYNSSEAMQE ASTCSLDALP  60
PLKPQVSLEK KRKQSDGGPS STSQTKVVKQ SKSRRKKTIC TSKGEVEEKK PKATELKSNK  120
ATIEEPPSGY IHVRARRGQA TDSHSLAERV RRERISERMK KLQGLVPGCD KVTGKALVLD  180
EIINYVQSLQ NQVEFLSMRL ASVNPVLYDF GVGYEEYMSQ PEEMGSISQP MSSVIQNSHI  240
QPTAFEAATN NLHQEVTDPA APFSQVTGSF LMQAMNSMCS FH*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50915.22e-53bHLH family protein