PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_02.1364 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 275aa MW: 31053.7 Da PI: 5.5924 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.3 | 6.6e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd l+ +++++G+++W++++ + g+ R+ k+c++rw +yl evm.model.AsparagusV1_02.1364 14 KGPWTPEEDAVLISYIQEHGPRNWRSVPIHTGLMRCSKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 51.1 | 3.2e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T+ E++ ++++ ++lG++ W++Ia++++ Rt++++k++w+++l evm.model.AsparagusV1_02.1364 67 RGNFTPHEEKMIIHLQTLLGNR-WAAIASYLP-QRTDNDIKNYWNTHL 112 89********************.*********.************996 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 275 aa Download sequence |
MVRPPCCDEV GIKKGPWTPE EDAVLISYIQ EHGPRNWRSV PIHTGLMRCS KSCRLRWTNY 60 LRPGIKRGNF TPHEEKMIIH LQTLLGNRWA AIASYLPQRT DNDIKNYWNT HLKKKIMKYR 120 TTIDSYMTPS DTTTIHQAVP SFLHASSTYA SSTENISRLL KDWMTPVADS NGANGTSAGA 180 CTGTILKQEA QENMTVGNNY DHSACNVALS PQEQLDSLLS FEDWDNSSAD AAFDESNQSI 240 ESNEGSLSLF ETWLLDETAE KMQGRLIEDW QQQY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08810.1 | 8e-90 | MYB family protein |