PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.132
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 263aa    MW: 28888.1 Da    PI: 8.4865
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.132genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-08162211147
                                   TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
               Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                                   r +++  E e lv+av++lG+g+W+ +  +     k+Rt  ++k++w ++
  evm.model.AsparagusV1_02.132 162 RRPFSVSEVEALVQAVEKLGTGRWRDVKIRAFdnaKHRTYVDLKDKWKTL 211
                                   678999********************9999989**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
MEAVTAILGG GLHVDVLLQG KKVRDDNKTL VQAGISRGDK LDDLGFTLEP NSIQAPPLLI  60
CPEEPRLLLP SDAAQPQTKL DLVPTSDGGR SNLKSEPPLN LIGNYLESDH DSVHSPADTL  120
SVDKTTEDVR PLIAIPSMSV ESLPMVPACK ARRSEIVQRR IRRPFSVSEV EALVQAVEKL  180
GTGRWRDVKI RAFDNAKHRT YVDLKDKWKT LVHTARISPQ QRRGEPVPQQ LLDRVLSAHA  240
YWAQQQAKLQ SKSGPADACL LI*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07540.12e-75MYB_related family protein