PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_02.122
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family GRAS
Protein Properties Length: 703aa    MW: 80743.4 Da    PI: 6.3428
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_02.122genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS393.71.9e-1203276981374
                          GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal 81 
                                   l++lL++cA++v+++d++ +++lL+++++++sp+gd  qRla+yf++AL+arla+++ e+y++ ++++ +    ++ l+a+
  evm.model.AsparagusV1_02.122 327 LRTLLVHCAQMVAADDQRSTNELLKQIRQHSSPTGDGSQRLAHYFANALEARLAGTGREIYNSYRVKRRT---ATDYLKAY 404
                                   6789***********************************************************9999998...9******* PP

                          GRAS  82 klfsevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeelee 160
                                   +l+  ++P+ k+sh+  Nq+I++  e+++ +H++Df+is G+QWp+L+q L++Rp+g p+lRiTg++ p++g   +e++ee
  evm.model.AsparagusV1_02.122 405 QLYLAACPFKKLSHFFSNQTIMNVSEKAKSIHVVDFGISFGFQWPSLIQRLSARPNGVPKLRITGIDLPQPGfrPAERIEE 485
                                   ***********************************************************************9********* PP

                          GRAS 161 tgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvv 241
                                   tg+rLa++A++++vpfe+++ +a+++ed+++e+L+++++E+l+Vn+ +q  +l de+v ++s+r+ vL+++++++P+v+++
  evm.model.AsparagusV1_02.122 486 TGRRLADYARSFNVPFEYKP-IASKWEDVRVEDLEIDKDEVLVVNCLFQFRYLADETVVVDSPRNMVLNTIRKMNPDVFIH 565
                                   ********************.7*********************************************************** PP

                          GRAS 242 veqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleea 322
                                      + +++++ F++rf eal+++sal+d+le+ +pre+e+r  +Ere++gre+ nv+aceg er er et+++W+ r  +a
  evm.model.AsparagusV1_02.122 566 GIVNGSYSAPFFVTRFREALYHFSALYDMLETIVPREDEQRLLIEREIFGREALNVIACEGLERMERPETYKQWQVRNLRA 646
                                   ********************************************************************************* PP

                          GRAS 323 GFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                                   GF + +++ +++k+ +  +rk++ + ++++e+s +l++gWk+r ++++S+W+
  evm.model.AsparagusV1_02.122 647 GFVQHHVNRDIVKKSRDKVRKYYHKDFNIDEDSRWLLQGWKGRIVYALSSWK 698
                                   ***********************889*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 703 aa     Download sequence    
MVMGTGMNEI HKNQFFLHQD QFLDIPFQTL IENSSPERDS HDDSEIFSDI ALNYIHQMLM  60
DEDDKIDNFH EYSALEAAEK PFYEILAQQY PPNSNPRSHS PDSTSPHYAN SSSFTGEGSS  120
SSSNGVIESN VPHEYSESQL PFEFGSQPLF NSINSYRNTF QGSWDGLNGV PNPFLENLPA  180
WSFNKGVEEA RKFLPSDDKL VINLESNKFS VPFEPKEERK FVEVKPEKEE REFLYSSFGS  240
RGRKNPHSDD DTSLEEGRSV KQSAVSNDDA LRSDEFDEVL LCHGDTFPKA INDIREALQH  300
VVASKSSQNG HGKGRGKKQT KKEVVDLRTL LVHCAQMVAA DDQRSTNELL KQIRQHSSPT  360
GDGSQRLAHY FANALEARLA GTGREIYNSY RVKRRTATDY LKAYQLYLAA CPFKKLSHFF  420
SNQTIMNVSE KAKSIHVVDF GISFGFQWPS LIQRLSARPN GVPKLRITGI DLPQPGFRPA  480
ERIEETGRRL ADYARSFNVP FEYKPIASKW EDVRVEDLEI DKDEVLVVNC LFQFRYLADE  540
TVVVDSPRNM VLNTIRKMNP DVFIHGIVNG SYSAPFFVTR FREALYHFSA LYDMLETIVP  600
REDEQRLLIE REIFGREALN VIACEGLERM ERPETYKQWQ VRNLRAGFVQ HHVNRDIVKK  660
SRDKVRKYYH KDFNIDEDSR WLLQGWKGRI VYALSSWKPS HV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.10.0GRAS family protein