PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.968

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 412aa MW: 45525.7 Da PI: 5.8935

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.968	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.4	8.1e-14	203	247	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ l++ + +++G+g+W++I+r + Rt+ q+ s+ qky evm.model.AsparagusV1_01.968 203 AWTEEEHRLFLLGLEKYGKGDWRSISRNFVVSRTPTQVASHAQKY 247 6*******************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MSNSGISTST MHMETSHIDL DDLKVGLLYD EVALQNVLNM TADGTKEERE MWRRKMSAVD 60 APFIEVLDIF ETGGTGGMSK DSVNKLEKNM DSGNVNESDH MDEAEEGGDV WNWDMNKKFE 120 NAFATYCNGI SDHWDRIAKE LGVDVEDVKK HYRLLVEDID AIEDDRVPLP SYLDDEVAEA 180 GAHGKKGGDG KGRAEQERRK GIAWTEEEHR LFLLGLEKYG KGDWRSISRN FVVSRTPTQV 240 ASHAQKYFIR LTSGTKDKRR SSIHDITSVN PTGEKVGPIT GQYVPSPAQQ THQTPAGSPR 300 VPTGQYVPSP AQQTHQTPAG SPRVPSGPAI GRPVVGPHAV GTPVNYPLPP NSVAPPLVYR 360 MPAPVTSNQV ENAYPEQHME NAYPEIQMEN AHPETPTKNT KNTFSKSNKR R*

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MSNSGISTST MHMETSHIDL DDLKVGLLYD EVALQNVLNM TADGTKEERE MWRRKMSAVD  60
APFIEVLDIF ETGGTGGMSK DSVNKLEKNM DSGNVNESDH MDEAEEGGDV WNWDMNKKFE  120
NAFATYCNGI SDHWDRIAKE LGVDVEDVKK HYRLLVEDID AIEDDRVPLP SYLDDEVAEA  180
GAHGKKGGDG KGRAEQERRK GIAWTEEEHR LFLLGLEKYG KGDWRSISRN FVVSRTPTQV  240
ASHAQKYFIR LTSGTKDKRR SSIHDITSVN PTGEKVGPIT GQYVPSPAQQ THQTPAGSPR  300
VPTGQYVPSP AQQTHQTPAG SPRVPSGPAI GRPVVGPHAV GTPVNYPLPP NSVAPPLVYR  360
MPAPVTSNQV ENAYPEQHME NAYPEIQMEN AHPETPTKNT KNTFSKSNKR R*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08520.1	3e-65	MYB family protein