PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.963
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family MYB_related
Protein Properties Length: 355aa    MW: 39723.3 Da    PI: 6.615
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.963genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.33.7e-13169213347
                                   SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
               Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                                   +WT+eE+ l++ + +++G+g+W++I+r +   Rt+ q+ s+ qky
  evm.model.AsparagusV1_01.963 169 AWTEEEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKY 213
                                   6*****************************99************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MRWVTTFGES MGGPRRRRRC GPSKRLWPGI DNVDEESGSV FEGASTWRQL ELRGDMDSGN  60
VNESGYMDVV VEGGDVWTWE MNKKFENAFA TYCYEIGDHW DRIAEELGVD VEDVKKHYRL  120
LEEDIDAIED DRVLLPSYLD DEVAEAGAHG KKGGDGKGRA EQERRKGIAW TEEEHRLFLL  180
GLEKYGKGDW RSISRNFVIS RTPTQVASHA QKYFIRLTPG TKDKRRSSIH DITSVNPTGE  240
KVGPITGQYV PSPAQQTHQT PAGSPRVPSG PAIGRPVVGS HAVGTPVNYP LPRNSVAPPL  300
VYRMPAPVTS NQVENAYPEQ QMENAYLEIQ MENAHPETPT KNTKNTFSKS NKRR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.17e-58MYB family protein