PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.96 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 238aa MW: 27095.9 Da PI: 10.1556 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 54.6 | 2e-17 | 101 | 189 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f+k++++s+v+ +l lp kf++++ + ++ +tlede+g++ +v + +++++ l++GW++F ++ L++gD++vF evm.model.AsparagusV1_01.96 101 FIKAMVRSHVSGCFWLGLPFKFCNDNL--PSGELRMTLEDEKGKEHDVLY--LGRKNG--LSGGWRGFSIDHSLEDGDVLVF 176 89*********************8883..234568***************..555555..9********************* PP EE-SSSEE..EEEEE CS B3 83 kldgrsefelvvkvf 97 +l++ +f +v+++ evm.model.AsparagusV1_01.96 177 ELTQAARF--KVHIV 189 *9987777..77765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MAAVVAEIDI SEEIIKQRVR ENLKLLEELG ISKDIREFAK REYKLWVGDT KDRYYRKRTS 60 TNQNNAGREY TGRIVSDNQK AAAVKRAEEL QRDLKSHYPS FIKAMVRSHV SGCFWLGLPF 120 KFCNDNLPSG ELRMTLEDEK GKEHDVLYLG RKNGLSGGWR GFSIDHSLED GDVLVFELTQ 180 AARFKVHIVK ALEEEKTEKS MTPKKKREPV SQKRPPKTGS GKQAGSAPKR GRRCIEN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 2e-40 | B3 family protein |