PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.95 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | B3 | ||||||||
Protein Properties | Length: 247aa MW: 27583.3 Da PI: 9.9077 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 60.6 | 2.6e-19 | 99 | 187 | 1 | 97 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvF 82 f+k +++s+v+ +l lp kf++e+ +++e ++lede+g++ v + +++++ l++GW++F+ +++L++gD++vF evm.model.AsparagusV1_01.95 99 FIKPMVRSHVSGGFWLGLPTKFCKENFSPNEL--RVILEDEKGKEHAVLY--LGRKNG--LSGGWRGFAIDHNLEDGDVLVF 174 89************************877555..7***************..555555..9********************* PP EE-SSSEE..EEEEE CS B3 83 kldgrsefelvvkvf 97 +l++ +f +v++ evm.model.AsparagusV1_01.95 175 ELSEPARF--KVHIM 187 *9765555..77775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MAAAAVEINS GEEILKERVR QNLKHLEEIG ISRDIVEFAR REYKLWADDP KQRYYRTSST 60 NANAAREYTG RIASEDQKIA ALKRAEEFQR DLTSHYPSFI KPMVRSHVSG GFWLGLPTKF 120 CKENFSPNEL RVILEDEKGK EHAVLYLGRK NGLSGGWRGF AIDHNLEDGD VLVFELSEPA 180 RFKVHIMKAI EGESPETDKT ADCAAAVSKT KASSGTKKAI QAVSKKRSLK TGSAKEALEA 240 TKRGRR* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G42700.1 | 5e-42 | B3 family protein |