PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.811

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

MYB_related

Protein Properties

Length: 1006aa MW: 112328 Da PI: 4.8766

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.811	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	32.8	1.7e-10	31	74	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l evm.model.AsparagusV1_01.811 31 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 74 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1006 aa Download sequence
MARISSLLVR KSAKQCKARG NEWLDLALKK TEWTREEDEK LLHLAKLMPT QWRTIAPIVG 60 RTPSQCLERY EKLLDAACAK DENYEANDDP RKLRPGEIDP NPESKPARPD PVDMDEDEKE 120 MLSEARARLA NTRGKKAKRK AREKQLEEAR RLASLQKRRE LKAAGIPTRQ RRRKRKGIDY 180 NAEIPFEKRP PPGFYDVSGE ERPVENPKFP TTIEELEGKR RVDIEAQLRK QDIAKNKIAQ 240 RQDAPSAILQ ANKLNDPEAV RKRSKLMLPA PQISDQELEE IAKMGYASDL ISGADELSEG 300 SGATRALLAN YSQTPRQGMT PMRTPQRTPA GKADAVMMEA ENLARLRESQ TPLLGGENPE 360 LHPSDFSGVT PRKREIQTPN PMATPLMSPG STGLTPRIGM TPSRDGNSFG ATPKSTPYRD 420 ELHINEDNEI HKQAELRRNL RSGLTSLPQP KNEYQIVIQP IPEENEEVEE KIEEDMSDKI 480 AREKALEQAR QEVLLRKRSK VLQRELPRPP AAALDLIRNM LMRKDEDKSS FVPPTLFEQA 540 DEMINKELLA LLEHDNAKYP LEEKSDKERK KGVKRAANGK SSMPVPEIED FEEDELKEAD 600 SLIREEVEFL QVAMGHENES LDDFVKAHDA CQEDLMYFPG RNTFGLASVA GSSEKLAALQ 660 NDFEIMKKRL DDEAKKATKL ENKIKLLTHG HQMRAGKLWS QIEATFKQMD TAATELECFQ 720 ALQKQEVVAA SYRVGSLMEE VNKQKGLERN LQQRYGDLIA EHDRVQKLLE EHRERLRLED 780 EITAKQRALE EEVAAKQRAL EEEVAAKNRA LEEEIVARSH TVDEEMKDVG ETDLSSSDPT 840 DADNADKVAN APDNLSKASN NEDMAPEGVG HSTESVATDA YVAETAHQVE NPHPQASAAS 900 NSSGLDEMMT IDSVQPIVDN STVSDSTAPT IANASDPTVI LRKSDVVASQ SSDADPIITE 960 VTVGDSSRQM DGPCLVSFGE NLTVNAELPN ESNTLASGSG EMESS*

Sequence ? help Back to Top

Protein Sequence Length: 1006 aa Download sequence

MARISSLLVR KSAKQCKARG NEWLDLALKK TEWTREEDEK LLHLAKLMPT QWRTIAPIVG  60
RTPSQCLERY EKLLDAACAK DENYEANDDP RKLRPGEIDP NPESKPARPD PVDMDEDEKE  120
MLSEARARLA NTRGKKAKRK AREKQLEEAR RLASLQKRRE LKAAGIPTRQ RRRKRKGIDY  180
NAEIPFEKRP PPGFYDVSGE ERPVENPKFP TTIEELEGKR RVDIEAQLRK QDIAKNKIAQ  240
RQDAPSAILQ ANKLNDPEAV RKRSKLMLPA PQISDQELEE IAKMGYASDL ISGADELSEG  300
SGATRALLAN YSQTPRQGMT PMRTPQRTPA GKADAVMMEA ENLARLRESQ TPLLGGENPE  360
LHPSDFSGVT PRKREIQTPN PMATPLMSPG STGLTPRIGM TPSRDGNSFG ATPKSTPYRD  420
ELHINEDNEI HKQAELRRNL RSGLTSLPQP KNEYQIVIQP IPEENEEVEE KIEEDMSDKI  480
AREKALEQAR QEVLLRKRSK VLQRELPRPP AAALDLIRNM LMRKDEDKSS FVPPTLFEQA  540
DEMINKELLA LLEHDNAKYP LEEKSDKERK KGVKRAANGK SSMPVPEIED FEEDELKEAD  600
SLIREEVEFL QVAMGHENES LDDFVKAHDA CQEDLMYFPG RNTFGLASVA GSSEKLAALQ  660
NDFEIMKKRL DDEAKKATKL ENKIKLLTHG HQMRAGKLWS QIEATFKQMD TAATELECFQ  720
ALQKQEVVAA SYRVGSLMEE VNKQKGLERN LQQRYGDLIA EHDRVQKLLE EHRERLRLED  780
EITAKQRALE EEVAAKQRAL EEEVAAKNRA LEEEIVARSH TVDEEMKDVG ETDLSSSDPT  840
DADNADKVAN APDNLSKASN NEDMAPEGVG HSTESVATDA YVAETAHQVE NPHPQASAAS  900
NSSGLDEMMT IDSVQPIVDN STVSDSTAPT IANASDPTVI LRKSDVVASQ SSDADPIITE  960
VTVGDSSRQM DGPCLVSFGE NLTVNAELPN ESNTLASGSG EMESS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	157	176	KRRELKAAGIPTRQRRRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein