PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.763 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 409aa MW: 45241.4 Da PI: 5.0842 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.6 | 6.5e-34 | 192 | 246 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k r+rWtpeLH++Fveav+qLGGsekAtPk +l+lmkv+gLt++hvkSHLQkYR+ evm.model.AsparagusV1_01.763 192 KSRMRWTPELHDSFVEAVNQLGGSEKATPKGVLKLMKVEGLTIYHVKSHLQKYRT 246 68****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 54.5 | 2.7e-17 | 194 | 245 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e+++ +v+av+qlGg t+k + + m +g+t +++ks++qky+ evm.model.AsparagusV1_01.763 194 RMRWTPELHDSFVEAVNQLGGSekaTPKGVLKLMKvEGLTIYHVKSHLQKYR 245 89******************99*****************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 409 aa Download sequence |
MGREMGSNNM AHPYASLFSD DAVCGPMLSS AQGYSPDFHF PSIPPQGMPS FDPSFISHPS 60 DDVLLPSMHS PCLGTRQPSI SFPKENSESW CPDSSQYIHS GDAQIQSICN MTSDVPLSHE 120 EWPEFSEIDD DLQALLNITD TTELQPKALC VADNSQKVPV QNKQVQQAIP SNSGQLTVVS 180 NPSSSCTAGA TKSRMRWTPE LHDSFVEAVN QLGGSEKATP KGVLKLMKVE GLTIYHVKSH 240 LQKYRTVRYR PESTQDKSED ETTSAERIPS VSLKKDFGLS EALRMQMEVQ KQLHEQLEIQ 300 RNLQLKLEEQ GRYLQKMLEQ QCKADGETPK TSSTLNAVHT ATSNVISSEK DDSEPRNVSI 360 SLESRESSQR VGDKQNLLKI ESHADQEFDP FDGSQSPPKK RAKGDMSI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28610.1 | 3e-67 | G2-like family protein |