PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.635
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family bHLH
Protein Properties Length: 221aa    MW: 24861.1 Da    PI: 4.9524
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.635genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH24.16.3e-0849118444
                                   HHHHHHHHHHHHHHHHHHHHHCTSCC.C...............................TTS-STCHHHH CS
                           HLH   4 ahnerErrRRdriNsafeeLrellPk.as............................kapskKlsKaeiL 44 
                                   ++ + Er+RR+++N+++  Lr+++P+                               + + kK s ++iL
  evm.model.AsparagusV1_01.635  49 KNIATERNRRRKLNDKLYALRSVVPNiTKiaeiaelekhkedkssvseiteeddgevRKRRKKRSRSSIL 118
                                   56689*********************66699999999999999999999999999988888889999998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    
MDMLEAEYNN YWETKMFYEE LDSWGIDEAL SNLYDSSSPE GPASPITTKN IATERNRRRK  60
LNDKLYALRS VVPNITKIAE IAELEKHKED KSSVSEITEE DDGEVRKRRK KRSRSSILAN  120
GSPGKPYIED IQVRVSEMGE KVQVVSITCT KKKDTLFRVC ELFESLNLKT TSANITSVCG  180
LLSHTLFVES DDMNSVQLKE KIEAALSGYD AMSPISSLSF *
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1106112RKRRKKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.12e-52bHLH family protein