PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.635 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | bHLH | ||||||||
Protein Properties | Length: 221aa MW: 24861.1 Da PI: 4.9524 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 24.1 | 6.3e-08 | 49 | 118 | 4 | 44 |
HHHHHHHHHHHHHHHHHHHHHCTSCC.C...............................TTS-STCHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPk.as............................kapskKlsKaeiL 44 ++ + Er+RR+++N+++ Lr+++P+ + + kK s ++iL evm.model.AsparagusV1_01.635 49 KNIATERNRRRKLNDKLYALRSVVPNiTKiaeiaelekhkedkssvseiteeddgevRKRRKKRSRSSIL 118 56689*********************66699999999999999999999999999988888889999998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 221 aa Download sequence |
MDMLEAEYNN YWETKMFYEE LDSWGIDEAL SNLYDSSSPE GPASPITTKN IATERNRRRK 60 LNDKLYALRS VVPNITKIAE IAELEKHKED KSSVSEITEE DDGEVRKRRK KRSRSSILAN 120 GSPGKPYIED IQVRVSEMGE KVQVVSITCT KKKDTLFRVC ELFESLNLKT TSANITSVCG 180 LLSHTLFVES DDMNSVQLKE KIEAALSGYD AMSPISSLSF * |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 106 | 112 | RKRRKKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57150.1 | 2e-52 | bHLH family protein |