PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.600 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | MYB | ||||||||
Protein Properties | Length: 394aa MW: 45319.5 Da PI: 6.1016 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.5 | 5.5e-17 | 175 | 221 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg WT eEd ll+++v+++G g W+ Ia+ + gR +kqc++rw+++l evm.model.AsparagusV1_01.600 175 RGQWTLEEDRLLARLVEEYGLGKWSHIAQFLS-GRIGKQCRERWHNHL 221 89******************************.*************97 PP | |||||||
2 | Myb_DNA-binding | 59.7 | 6.4e-19 | 227 | 269 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 ++ W++eEd++l++a+ +lG++ W+ Ia++++ gRt++++k++w+ evm.model.AsparagusV1_01.600 227 KDTWSEEEDKILIQAHIELGNK-WAEIAKRLP-GRTENSIKNHWN 269 679*******************.*********.***********8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 394 aa Download sequence |
MDFDCLKNQL SFESSANSNE FQDLQRYFND SKDDDLANSS YEFPSLDDIC FKPDMMSNNR 60 EILPLDDFTD LESTNMMLIR SFQHSNMDLS IYDDDDQHRS PYVMESQPHL SRNSSSSSSS 120 SVVVHDVQPL SAFPPSDGFT FQISNSSSLL YHKEANMNIK FPTKKRTQKK SNVVRGQWTL 180 EEDRLLARLV EEYGLGKWSH IAQFLSGRIG KQCRERWHNH LRPNIKKDTW SEEEDKILIQ 240 AHIELGNKWA EIAKRLPGRT ENSIKNHWNA TKRRQFSRKR TRISKYPKSG TPLQNYIKSL 300 GMNPVTQPLL GSIDQNSSFE ENFIQNDRFV PACSFNDVSG YFHGESIADH FGGNERFEME 360 MDWNSGVTAI KAKVEMDLVE MMALKNNDSG SSF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18770.1 | 6e-71 | MYB family protein |