PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.450

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

CPP

Protein Properties

Length: 550aa MW: 60377.9 Da PI: 8.8748

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.450	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	41.7	2.4e-13	90	129	2	42
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkeek 42 +kk+CnCk+s+Clk+YCeCf+ag++C+ C+C++C+N+ e+ evm.model.AsparagusV1_01.450 90 RKKNCNCKHSRCLKLYCECFSAGVYCDG-CNCTNCCNNVEN 129 689***********************.******9875 PP
2	TCR	51	2.8e-16	172	211	1	40
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 k++kgC+Ckks ClkkYCeCf+a+ Cse+CkC dCkN e evm.model.AsparagusV1_01.450 172 KHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFE 211 589***********************************65 PP

Sequence ? help Back to Top
Protein Sequence Length: 550 aa Download sequence
MEQGTSSGPS DFPPKKLVRH FTARTPARHR RRLPERRAVA PTPQPPPQKQ HLTCPAAPIP 60 RPSVPISVKP ESPKSRPRPI YEVKDGTPTR KKNCNCKHSR CLKLYCECFS AGVYCDGCNC 120 TNCCNNVENE AARHEAVEVT LERNPNAFRP KIGSSPHAVR DNKEEAGSIV GKHNKGCHCK 180 KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF HADHGSSFTY MQQAANAVLN 240 GAIGPSGYGS PASKKRKNHD LFYATSVKDQ PVHRLASFPQ ASNLKSSGPP PSSSIPVARA 300 VNPAPVGSSK VTYRSLLADI VQQEDVKQLC RILVVVSGEA AKSHPDKKNQ EEKPAERDEH 360 TESLLASNHE RDESQREPYV RKVSADDRSS GTNADKTGTE DSGSDSLDEQ KSDRPMSPGT 420 LALMCDEQDT LFVTSKNQST SSRFPQNRSM SEVYANQERS VLTAFRDSLI KLIHCGRVKE 480 SKYSPTMTMK SDLLNYKESV VNGNARVPST YSQIPQTVNV IPVSSNNHLP SKSGNPITEN 540 GVVKLRDGE*

Sequence ? help Back to Top

Protein Sequence Length: 550 aa Download sequence

MEQGTSSGPS DFPPKKLVRH FTARTPARHR RRLPERRAVA PTPQPPPQKQ HLTCPAAPIP  60
RPSVPISVKP ESPKSRPRPI YEVKDGTPTR KKNCNCKHSR CLKLYCECFS AGVYCDGCNC  120
TNCCNNVENE AARHEAVEVT LERNPNAFRP KIGSSPHAVR DNKEEAGSIV GKHNKGCHCK  180
KSGCLKKYCE CFQANILCSE NCKCMDCKNF EGSEERKALF HADHGSSFTY MQQAANAVLN  240
GAIGPSGYGS PASKKRKNHD LFYATSVKDQ PVHRLASFPQ ASNLKSSGPP PSSSIPVARA  300
VNPAPVGSSK VTYRSLLADI VQQEDVKQLC RILVVVSGEA AKSHPDKKNQ EEKPAERDEH  360
TESLLASNHE RDESQREPYV RKVSADDRSS GTNADKTGTE DSGSDSLDEQ KSDRPMSPGT  420
LALMCDEQDT LFVTSKNQST SSRFPQNRSM SEVYANQERS VLTAFRDSLI KLIHCGRVKE  480
SKYSPTMTMK SDLLNYKESV VNGNARVPST YSQIPQTVNV IPVSSNNHLP SKSGNPITEN  540
GVVKLRDGE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G29000.1	1e-147	CPP family protein