PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.427

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

TCP

Protein Properties

Length: 330aa MW: 36961.1 Da PI: 7.4992

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.427	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	117	2.3e-36	122	213	1	91
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssaseceae 76 a+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++ + +++ evm.model.AsparagusV1_01.427 122 ATGRKDRHSKVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDQLAELppwhpN-----TSTDT 197 589**************************************************************555441.....33222 PP TCP 77 sssssas.nsssgkaa 91 +++ + ++s++a+ evm.model.AsparagusV1_01.427 198 QKQPHVVeVNNSPQAQ 213 2221111011112222 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSAEPHYSIE NCLEIKGVLW PSLVNAKENP SVIIPPNPKL EEEKKKRLRS LDPWKTHFHP 60 VPRNGEGGRN QDEEAQIQSF LLHHIHDLKY QQQNQQSQPP TKKQSRISGQ IVPFQGGHIV 120 RATGRKDRHS KVCTAKGLRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLIKNAKAAI 180 DQLAELPPWH PNTSTDTQKQ PHVVEVNNSP QAQDLHLSLQ SLQDPNPSIF SNSGHLGFDG 240 NSVTPWNMAD SADCGSGQFY AQSQFYTQRE PLQSSNSLFH LLSPSIQDIS FGSGTLDFSG 300 FRIPSRVYEK EAHDGSALEL PDSASASYY*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	5e-46	TCP family protein