PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.427 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | TCP | ||||||||
Protein Properties | Length: 330aa MW: 36961.1 Da PI: 7.4992 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 117 | 2.3e-36 | 122 | 213 | 1 | 91 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....ssssaseceae 76 a+g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak+ai++l+++ + +++ evm.model.AsparagusV1_01.427 122 ATGRKDRHSKVCTAKGLRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDQLAELppwhpN-----TSTDT 197 589**************************************************************555441.....33222 PP TCP 77 sssssas.nsssgkaa 91 +++ + ++s++a+ evm.model.AsparagusV1_01.427 198 QKQPHVVeVNNSPQAQ 213 2221111011112222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 330 aa Download sequence |
MSAEPHYSIE NCLEIKGVLW PSLVNAKENP SVIIPPNPKL EEEKKKRLRS LDPWKTHFHP 60 VPRNGEGGRN QDEEAQIQSF LLHHIHDLKY QQQNQQSQPP TKKQSRISGQ IVPFQGGHIV 120 RATGRKDRHS KVCTAKGLRD RRVRLSAHTA IQFYDVQDRL GYDRPSKAVD WLIKNAKAAI 180 DQLAELPPWH PNTSTDTQKQ PHVVEVNNSP QAQDLHLSLQ SLQDPNPSIF SNSGHLGFDG 240 NSVTPWNMAD SADCGSGQFY AQSQFYTQRE PLQSSNSLFH LLSPSIQDIS FGSGTLDFSG 300 FRIPSRVYEK EAHDGSALEL PDSASASYY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 5e-46 | TCP family protein |