PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.3601

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

WRKY

Protein Properties

Length: 1158aa MW: 129006 Da PI: 7.9509

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.3601	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	75.7	5.5e-24	314	364	2	51
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit 51 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+a+d ++++++ evm.model.AsparagusV1_01.3601 314 ADGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCPVRKQVQRCADDRTILITI 364 7*************************99**********999999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 1158 aa Download sequence
MERGGVGLIL DTSSFVVSGG SHVEYSSNRL FSNRSRVPDE MDFFSKKPSP PAXXXRLPVM 60 MTGLHLLTAS VGSDRSTADD GSSINEEDRE SRADQLSLMR AEVGKLKEEN QRLRSVLSQV 120 TGNYNSLHMQ FITFMQQKNT QRQINNDGSP QVQEVDIDEK MDTKKQAIIP RQFMDLGLAS 180 VDVDDGSSME GAGGGGSRER STSPSNNVDI SNINFEGQLA EDGSLNNNEL GYNINSGFKK 240 EVASSFDRSI KSQSSGSVDV VCREEIRERS NQGWGPNKSP KLSTTCNNSD QAQEATMRKA 300 RVSVRARSEA PMIADGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ VQRCADDRTI 360 LITILKRNTA PLASSRKPWR PHSAAATWAP PQHVDTAHHQ PELPPTLSRP SSSQTLAPCS 420 PPPLPTGTST SPRSPNLLHQ QSSSQRPPFF SVSAIGFRFC RLPIFGLQMF LVAGGSGSEE 480 EEDSNQPNPL KGDERLGELL ERGWNRPDQS PASVPLPWER EEGFADAGEK ETGKRKRVKA 540 PTLAELTIED EELRRLRREG MTLRERISIP KAGVTKEILE KIHDFWRRSE LARLKFHEDL 600 AHDMKTAHEI VERRTGGLVI WRAGSVMVVY RGSNYKRPSK SQFLGVETSP AQASHGGGTS 660 FVPDVSSEAP GNDNHSPSLT LDKVRSLQTN LADSMTEEEA EFNSLLDGLG PRFVDWWGTG 720 LFPVDADLLP QTIPGYKTPL RMLPTGMRPR LTNAEMTNLR KLARKLPCHF ALGRNRHHQG 780 LAVAILKLWE KSLVVKIAVK RGIQNTNNKL MAEELKNLTG GILLLRNKYY IVIYRGKDFL 840 PTSVAAVLAE REELSKDVQE VEEKARNSSI GESSIDNNGG YALAGTLAEF QEAQARWGRE 900 VTAEEKKAMK EEAARAESAR LFKRIEHKFS IAQAKKLRAE KLLAKIEASM VPVNPSDDQE 960 MITDEERSVF RRIGLQMKSY LPLGIRGVFD GVIENMHLHW KHRELVKLIS KQKTLSFVED 1020 TARLLEYESG GILVAIERVP KGFALIYYRG KNYQRPFCLR PRNLLTKAKA LKRAVAMQRH 1080 EALSQHITEL EKTIKKMKSD LGYPETEGSD NSMGFQSAHA SDNNEMEGEE FVSDSEDEFV 1140 SGPEDGEFVS DSEDDEL*

Sequence ? help Back to Top

Protein Sequence Length: 1158 aa Download sequence

MERGGVGLIL DTSSFVVSGG SHVEYSSNRL FSNRSRVPDE MDFFSKKPSP PAXXXRLPVM  60
MTGLHLLTAS VGSDRSTADD GSSINEEDRE SRADQLSLMR AEVGKLKEEN QRLRSVLSQV  120
TGNYNSLHMQ FITFMQQKNT QRQINNDGSP QVQEVDIDEK MDTKKQAIIP RQFMDLGLAS  180
VDVDDGSSME GAGGGGSRER STSPSNNVDI SNINFEGQLA EDGSLNNNEL GYNINSGFKK  240
EVASSFDRSI KSQSSGSVDV VCREEIRERS NQGWGPNKSP KLSTTCNNSD QAQEATMRKA  300
RVSVRARSEA PMIADGCQWR KYGQKMAKGN PCPRAYYRCT MAAGCPVRKQ VQRCADDRTI  360
LITILKRNTA PLASSRKPWR PHSAAATWAP PQHVDTAHHQ PELPPTLSRP SSSQTLAPCS  420
PPPLPTGTST SPRSPNLLHQ QSSSQRPPFF SVSAIGFRFC RLPIFGLQMF LVAGGSGSEE  480
EEDSNQPNPL KGDERLGELL ERGWNRPDQS PASVPLPWER EEGFADAGEK ETGKRKRVKA  540
PTLAELTIED EELRRLRREG MTLRERISIP KAGVTKEILE KIHDFWRRSE LARLKFHEDL  600
AHDMKTAHEI VERRTGGLVI WRAGSVMVVY RGSNYKRPSK SQFLGVETSP AQASHGGGTS  660
FVPDVSSEAP GNDNHSPSLT LDKVRSLQTN LADSMTEEEA EFNSLLDGLG PRFVDWWGTG  720
LFPVDADLLP QTIPGYKTPL RMLPTGMRPR LTNAEMTNLR KLARKLPCHF ALGRNRHHQG  780
LAVAILKLWE KSLVVKIAVK RGIQNTNNKL MAEELKNLTG GILLLRNKYY IVIYRGKDFL  840
PTSVAAVLAE REELSKDVQE VEEKARNSSI GESSIDNNGG YALAGTLAEF QEAQARWGRE  900
VTAEEKKAMK EEAARAESAR LFKRIEHKFS IAQAKKLRAE KLLAKIEASM VPVNPSDDQE  960
MITDEERSVF RRIGLQMKSY LPLGIRGVFD GVIENMHLHW KHRELVKLIS KQKTLSFVED  1020
TARLLEYESG GILVAIERVP KGFALIYYRG KNYQRPFCLR PRNLLTKAKA LKRAVAMQRH  1080
EALSQHITEL EKTIKKMKSD LGYPETEGSD NSMGFQSAHA SDNNEMEGEE FVSDSEDEFV  1140
SGPEDGEFVS DSEDDEL*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	3e-54	WRKY family protein