PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3572
Organism
Asparagus officinalis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family G2-like
Protein Properties Length: 453aa    MW: 50284.8 Da    PI: 5.7362
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3572genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like102.72.3e-32242296155
                        G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                    k+rlrWt eLHerFveav++L G+ekAtPk +l+lm+v+gLt++hvkSHLQkYRl
  evm.model.AsparagusV1_01.3572 242 KQRLRWTLELHERFVEAVNKLDGAEKATPKGVLKLMNVEGLTIYHVKSHLQKYRL 296
                                    79****************************************************8 PP
2Myb_DNA-binding52.89.5e-17244295148
                                    TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
                Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 
                                    r+rWT e++e++v+av++l g    t+k + + m+ +g+t +++ks++qky+
  evm.model.AsparagusV1_01.3572 244 RLRWTLELHERFVEAVNKLDGAekaTPKGVLKLMNvEGLTIYHVKSHLQKYR 295
                                    89******************99*****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 453 aa     Download sequence    
MNTVKKSNSP EGSLSSSHAS SSSEFSYIQT GIINSSSLQT GLQFNHPNLI QEPEMRSPLS  60
NVPHPQCSEN PFSRSSTFCT RLFLSSPSSS MTCRQLKNLP FLPHPPKSEQ LVSAVQCSSS  120
PSLFSGDMCD VHTEGEHSDD LMKDFLNLSG DGSDGNFHQE NHENSSTINE QMDLQFLSEQ  180
LGIEMADNGE SPCLDDLYDV PQVSCVPPST SESNQNNQQL SPPVKVQLHP TLSTSSAPAA  240
NKQRLRWTLE LHERFVEAVN KLDGAEKATP KGVLKLMNVE GLTIYHVKSH LQKYRLAKYL  300
PETKEGKRTS SSEEKKEPLV SNKNESFDRN KHVTEALRLQ IEVQKQLHEQ LEVQRKLQLR  360
IEEHASFLQK ILEQQQKSSN SFISSKPAQS QEVQPESSDD TSVEQAESKD GSISSRSGQK  420
RKAIDLESDS VSSEKRQCVK LDEKLEGVSS TL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13040.17e-96G2-like family protein