PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.3516 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | G2-like | ||||||||
Protein Properties | Length: 241aa MW: 26571.3 Da PI: 9.3584 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 107.1 | 9.9e-34 | 32 | 86 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprlrWt +LHerFv+av+qLGG+ekAtPkti+++m+vkgLtl h+kSHLQkYRl evm.model.AsparagusV1_01.3516 32 KPRLRWTADLHERFVDAVAQLGGPEKATPKTIMRTMGVKGLTLFHLKSHLQKYRL 86 79****************************************************8 PP | |||||||
2 | Myb_DNA-binding | 71.5 | 1.3e-22 | 34 | 85 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++e++vdav+qlGg+ t+ktI+rtmg kg+tl ++ks++qky+ evm.model.AsparagusV1_01.3516 34 RLRWTADLHERFVDAVAQLGGPekaTPKTIMRTMGvKGLTLFHLKSHLQKYR 85 89*************************************************7 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 241 aa Download sequence |
MFSGLIQRQE SSIPAQDEIH GGPSLVLTAD PKPRLRWTAD LHERFVDAVA QLGGPEKATP 60 KTIMRTMGVK GLTLFHLKSH LQKYRLGKQS GKEMSEQSKD ASYLLETPSS SALSPRLPTP 120 DANEGQEVKE ALRAQMEVQR RLHEQVEVQK HVQIRMDAYH KYIDSLLDKA CKIAHEQISS 180 SGLNSPLMCS SSVPLSPSSL HQITVGGITL QSPESKSSLS SIGEGQFFYQ KSPELKRKLT 240 * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G24120.1 | 9e-74 | G2-like family protein |