PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | evm.model.AsparagusV1_01.3309 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
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Family | C2H2 | ||||||||
Protein Properties | Length: 149aa MW: 17201.6 Da PI: 8.6327 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.1 | 3.2e-05 | 70 | 92 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk F + + ++H +++ evm.model.AsparagusV1_01.3309 70 FMCRKCGKAFAVRGDWRTHEKNC 92 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 149 aa Download sequence |
MQMHMWGHGS QYRKGPESLR GIQPTAMLRL PCYCCAPGCR NNIDHPRSKP LKDFRTLQTH 60 YKRKHGIKPF MCRKCGKAFA VRGDWRTHEK NCGKRWYCIC GSDFKHKRSL KDHVKAFGHG 120 HAVHETDCLE EEEEDPSSEI EQDCEASQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 4e-86 | C2H2 family protein |