PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

evm.model.AsparagusV1_01.3120

Organism

Asparagus officinalis

Taxonomic ID

4686

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus

Family

Nin-like

Protein Properties

Length: 1233aa MW: 135158 Da PI: 6.6853

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
evm.model.AsparagusV1_01.3120	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	39.9	8.5e-13	909	934	23	48
RWP-RK 23 keLgvclTvLKriCRqyGIkRWPhRk 48 + gvc++vLKriCR++GI RWP+Rk evm.model.AsparagusV1_01.3120 909 ENPGVCTSVLKRICRENGIIRWPYRK 934 5569*********************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 1233 aa Download sequence
MDPVLISKLG YIQLQARDLD RTNALFFRVE GLKKGESVEF ENLIGRNKAL ELVVAKDYVS 60 TVREYEECIE RDPGVSSGEG LCFDCSSTTS PMKIGSNAWG IPTGSSAHHG STDTSLFSSS 120 LPVLPHEKLK LVDVDGVQSV DDSSSELDKL KDAMDELDLQ EIGSLLPDDE EELLAGIMDD 180 FDLSGLPSQV EELEDYDIFD SGGGMELESD PIENLTLGMT KTSINDGYIG NSINNYGLPN 240 GVGAIAGEHP YGEHPSRTLF VRNINSNVED SELRTLFEQY GDIRTLYTAC KHRGFVMISY 300 YDIRSARTAM RALQNKPLRR RKLDIHFSIP KDNPSDKDMN QGTLVVFNLD PSVSNDDLLK 360 LFGTYGQVKE IRETPHKRHH KFIEYYDVRD AEAALRSLNR ADIAGKRIKL EPSRPGGARR 420 TAMQQLTQEI DHDETRSYRH PVGSPLTSSP PGVWAQFGSP SENSPLQSIS RSPISGVNGH 480 LGGINGLASV LPPFISNTAK ISPIGKDQRR INHTDPVFSN SSSSQGAIIQ QPHSFPDNSS 540 GILPNMSSSP RNLSSFCPST SNASAVGTLS GSQFLWGSPT SIGHSLTSNS NGKGHGIPYT 600 NRHAAFLASS QSHRHSHHVG SAPSGIPFER PLGYFPESPD TSFMNSVAFG GTGTSRNEGS 660 LMMNYARSPM NSVALLSGHI SDNGSPNFRM LPSQRMGPSF FGNAPYSGFG TIGYEGLTER 720 TRSRRVDNNG SQLDSKKQYQ LDLEKIASGE DTRTTLMIKN IPNKYTSKML LAAIDETHKG 780 TYDFLYLPID FKNKCNVGYA FINMVSSSHI VSFYQTFNGK KWEKFNSEKV ASLAYARIQG 840 TAALVTHFQN SSLMNEDKRC RPILFNSQGS AADDQEPFTS NVMEVRGFDQ DATMLGDSSE 900 SPSKKSQSEN PGVCTSVLKR ICRENGIIRW PYRKFLAGKT IEDIKKEAAR EKSKEQAALS 960 NKAKNLDAQK MMPSTAAGLS THGNLVQSIT TGHGFSASGN MLQPQANRSF QHGLHSTVQN 1020 QTRHIPTYFD DFKYGFPANG LSCTSIKWWG SNSIESSEKI DSGKSAANKD GKQNSCKFNE 1080 SSECMMIDDQ SDGSSIKDSA TKIEPSASLV SLRKRALEFG IESLQVGISN CEPYKLGGTL 1140 RSVQAQKTWC VAKPSSEEAT LVANINYACS QVDCSISYQG FPCFYPDTLI SHASIAMNLY 1200 YQANGRHYWN CDFKNSALIV TTNPSFGICV YT*

Sequence ? help Back to Top

Protein Sequence Length: 1233 aa Download sequence

MDPVLISKLG YIQLQARDLD RTNALFFRVE GLKKGESVEF ENLIGRNKAL ELVVAKDYVS  60
TVREYEECIE RDPGVSSGEG LCFDCSSTTS PMKIGSNAWG IPTGSSAHHG STDTSLFSSS  120
LPVLPHEKLK LVDVDGVQSV DDSSSELDKL KDAMDELDLQ EIGSLLPDDE EELLAGIMDD  180
FDLSGLPSQV EELEDYDIFD SGGGMELESD PIENLTLGMT KTSINDGYIG NSINNYGLPN  240
GVGAIAGEHP YGEHPSRTLF VRNINSNVED SELRTLFEQY GDIRTLYTAC KHRGFVMISY  300
YDIRSARTAM RALQNKPLRR RKLDIHFSIP KDNPSDKDMN QGTLVVFNLD PSVSNDDLLK  360
LFGTYGQVKE IRETPHKRHH KFIEYYDVRD AEAALRSLNR ADIAGKRIKL EPSRPGGARR  420
TAMQQLTQEI DHDETRSYRH PVGSPLTSSP PGVWAQFGSP SENSPLQSIS RSPISGVNGH  480
LGGINGLASV LPPFISNTAK ISPIGKDQRR INHTDPVFSN SSSSQGAIIQ QPHSFPDNSS  540
GILPNMSSSP RNLSSFCPST SNASAVGTLS GSQFLWGSPT SIGHSLTSNS NGKGHGIPYT  600
NRHAAFLASS QSHRHSHHVG SAPSGIPFER PLGYFPESPD TSFMNSVAFG GTGTSRNEGS  660
LMMNYARSPM NSVALLSGHI SDNGSPNFRM LPSQRMGPSF FGNAPYSGFG TIGYEGLTER  720
TRSRRVDNNG SQLDSKKQYQ LDLEKIASGE DTRTTLMIKN IPNKYTSKML LAAIDETHKG  780
TYDFLYLPID FKNKCNVGYA FINMVSSSHI VSFYQTFNGK KWEKFNSEKV ASLAYARIQG  840
TAALVTHFQN SSLMNEDKRC RPILFNSQGS AADDQEPFTS NVMEVRGFDQ DATMLGDSSE  900
SPSKKSQSEN PGVCTSVLKR ICRENGIIRW PYRKFLAGKT IEDIKKEAAR EKSKEQAALS  960
NKAKNLDAQK MMPSTAAGLS THGNLVQSIT TGHGFSASGN MLQPQANRSF QHGLHSTVQN  1020
QTRHIPTYFD DFKYGFPANG LSCTSIKWWG SNSIESSEKI DSGKSAANKD GKQNSCKFNE  1080
SSECMMIDDQ SDGSSIKDSA TKIEPSASLV SLRKRALEFG IESLQVGISN CEPYKLGGTL  1140
RSVQAQKTWC VAKPSSEEAT LVANINYACS QVDCSISYQG FPCFYPDTLI SHASIAMNLY  1200
YQANGRHYWN CDFKNSALIV TTNPSFGICV YT*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	316	322	KPLRRRK