PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.AsparagusV1_01.3120
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; Asparagales; Asparagaceae; Asparagoideae; Asparagus
Family Nin-like
Protein Properties Length: 1233aa    MW: 135158 Da    PI: 6.6853
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.AsparagusV1_01.3120genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK39.98.5e-139099342348
                         RWP-RK  23 keLgvclTvLKriCRqyGIkRWPhRk 48 
                                     + gvc++vLKriCR++GI RWP+Rk
  evm.model.AsparagusV1_01.3120 909 ENPGVCTSVLKRICRENGIIRWPYRK 934
                                    5569*********************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1233 aa     Download sequence    
MDPVLISKLG YIQLQARDLD RTNALFFRVE GLKKGESVEF ENLIGRNKAL ELVVAKDYVS  60
TVREYEECIE RDPGVSSGEG LCFDCSSTTS PMKIGSNAWG IPTGSSAHHG STDTSLFSSS  120
LPVLPHEKLK LVDVDGVQSV DDSSSELDKL KDAMDELDLQ EIGSLLPDDE EELLAGIMDD  180
FDLSGLPSQV EELEDYDIFD SGGGMELESD PIENLTLGMT KTSINDGYIG NSINNYGLPN  240
GVGAIAGEHP YGEHPSRTLF VRNINSNVED SELRTLFEQY GDIRTLYTAC KHRGFVMISY  300
YDIRSARTAM RALQNKPLRR RKLDIHFSIP KDNPSDKDMN QGTLVVFNLD PSVSNDDLLK  360
LFGTYGQVKE IRETPHKRHH KFIEYYDVRD AEAALRSLNR ADIAGKRIKL EPSRPGGARR  420
TAMQQLTQEI DHDETRSYRH PVGSPLTSSP PGVWAQFGSP SENSPLQSIS RSPISGVNGH  480
LGGINGLASV LPPFISNTAK ISPIGKDQRR INHTDPVFSN SSSSQGAIIQ QPHSFPDNSS  540
GILPNMSSSP RNLSSFCPST SNASAVGTLS GSQFLWGSPT SIGHSLTSNS NGKGHGIPYT  600
NRHAAFLASS QSHRHSHHVG SAPSGIPFER PLGYFPESPD TSFMNSVAFG GTGTSRNEGS  660
LMMNYARSPM NSVALLSGHI SDNGSPNFRM LPSQRMGPSF FGNAPYSGFG TIGYEGLTER  720
TRSRRVDNNG SQLDSKKQYQ LDLEKIASGE DTRTTLMIKN IPNKYTSKML LAAIDETHKG  780
TYDFLYLPID FKNKCNVGYA FINMVSSSHI VSFYQTFNGK KWEKFNSEKV ASLAYARIQG  840
TAALVTHFQN SSLMNEDKRC RPILFNSQGS AADDQEPFTS NVMEVRGFDQ DATMLGDSSE  900
SPSKKSQSEN PGVCTSVLKR ICRENGIIRW PYRKFLAGKT IEDIKKEAAR EKSKEQAALS  960
NKAKNLDAQK MMPSTAAGLS THGNLVQSIT TGHGFSASGN MLQPQANRSF QHGLHSTVQN  1020
QTRHIPTYFD DFKYGFPANG LSCTSIKWWG SNSIESSEKI DSGKSAANKD GKQNSCKFNE  1080
SSECMMIDDQ SDGSSIKDSA TKIEPSASLV SLRKRALEFG IESLQVGISN CEPYKLGGTL  1140
RSVQAQKTWC VAKPSSEEAT LVANINYACS QVDCSISYQG FPCFYPDTLI SHASIAMNLY  1200
YQANGRHYWN CDFKNSALIV TTNPSFGICV YT*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1316322KPLRRRK